Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011358.1-P | Field mustard | plastid | 100.0 | 100.0 |
| CDX68864 | Canola | plastid | 83.43 | 84.94 |
| Zm00001d048981_P001 | Maize | cytosol | 40.83 | 83.13 |
| AT4G32590.3 | Thale cress | plastid | 76.92 | 72.22 |
| HORVU2Hr1G042420.1 | Barley | cytosol | 52.66 | 68.99 |
| KRH16041 | Soybean | plastid | 57.4 | 65.54 |
| PGSC0003DMT400003234 | Potato | cytosol, mitochondrion | 59.17 | 64.1 |
| KRH05069 | Soybean | plastid | 58.58 | 61.49 |
| KXG22507 | Sorghum | plastid | 63.91 | 60.0 |
| VIT_04s0008g04240.t01 | Wine grape | extracellular | 60.95 | 59.88 |
| GSMUA_Achr1P14520_001 | Banana | plastid | 61.54 | 56.52 |
| TraesCS1A01G383200.1 | Wheat | plastid | 59.17 | 55.56 |
| TraesCS1D01G391000.1 | Wheat | plastid | 59.76 | 55.49 |
| Zm00001d038946_P001 | Maize | plastid | 58.58 | 49.75 |
| TraesCS1B01G409300.1 | Wheat | plastid | 53.85 | 47.15 |
| Zm00001d027567_P001 | Maize | cytosol | 37.87 | 46.04 |
| Os05t0555300-01 | Rice | plastid | 56.21 | 45.24 |
| Zm00001d039288_P001 | Maize | cytosol | 36.69 | 44.6 |
| Solyc08g022140.1.1 | Tomato | cytosol | 21.3 | 39.56 |
| CDY30147 | Canola | mitochondrion | 22.49 | 38.0 |
| CDY63822 | Canola | cytosol | 23.67 | 34.78 |
| Zm00001d041837_P001 | Maize | endoplasmic reticulum, extracellular | 25.44 | 31.39 |
| HORVU1Hr1G084520.15 | Barley | nucleus | 37.28 | 28.25 |
| CDX97734 | Canola | plastid | 32.54 | 26.96 |
| CDY20191 | Canola | plastid | 30.77 | 25.49 |
| CDY30148 | Canola | plastid | 13.61 | 16.08 |
Protein Annotations
| EnsemblPlants:CDX75257 | EnsemblPlantsGene:GSBRNA2T00121120001 | Gene3D:3.10.20.30 | GO:A0A078CEJ4 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0009055 | GO:GO:0051536 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:Beta-grasp_dom_sf |
| InterPro:IPR001041 | InterPro:IPR012675 | PANTHER:PTHR23426 | PANTHER:PTHR23426:SF32 | PFAM:PF00111 | ProteinID:CDX75257 |
| ProteinID:CDX75257.1 | SEG:seg | SUPFAM:SSF54292 | UniParc:UPI000254642A | MapMan:35.1 | : |
Description
BnaA01g04450D
Coordinates
chrLK031804:+:345492..346789
Molecular Weight (calculated)
18404.0 Da
IEP (calculated)
9.529
GRAVY (calculated)
-0.514
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLGFNLGF SFSGVKIHQH RQVSATGRAR VISCCSSSSS EASQQGISAT TPPPEIELEF FGPKPGSDGT YPRDKAKAVS GEKLLRSIMQ DNKLELYATY
101: GKVMNCGGGG SCGTCIILDG RELLNERTDT ENKYLKKKPE SWRLACQTIV GNKENSGKVV VQRIPQWKK
101: GKVMNCGGGG SCGTCIILDG RELLNERTDT ENKYLKKKPE SWRLACQTIV GNKENSGKVV VQRIPQWKK
001: MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKVVVQRIPQ WKK
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKVVVQRIPQ WKK
Arabidopsis Description
2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUE0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.