Factsheet for TraesCS1B01G409300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G383200.1	Wheat	plastid	78.76	84.44
TraesCS1D01G391000.1	Wheat	plastid	74.61	79.12
HORVU2Hr1G042420.1	Barley	cytosol	52.85	79.07
Zm00001d048981_P001	Maize	cytosol	31.09	72.29
KXG22507	Sorghum	plastid	59.59	63.89
GSMUA_Achr1P14520_001	Banana	plastid	53.89	56.52
Zm00001d038946_P001	Maize	plastid	55.96	54.27
PGSC0003DMT400003234	Potato	cytosol, mitochondrion	43.52	53.85
CDX75257	Canola	plastid	47.15	53.85
Bra011358.1-P	Field mustard	plastid	47.15	53.85
CDX68864	Canola	plastid	46.11	53.61
VIT_04s0008g04240.t01	Wine grape	extracellular	47.67	53.49
KRH05069	Soybean	plastid	44.56	53.42
KRH16041	Soybean	plastid	39.9	52.03
AT4G32590.3	Thale cress	plastid	48.19	51.67
Os05t0555300-01	Rice	plastid	53.89	49.52
Zm00001d027567_P001	Maize	cytosol	32.12	44.6
Zm00001d039288_P001	Maize	cytosol	30.57	42.45
HORVU1Hr1G084520.15	Barley	nucleus	48.19	41.7
Solyc08g022140.1.1	Tomato	cytosol	17.1	36.26
Zm00001d041837_P001	Maize	endoplasmic reticulum, extracellular	22.8	32.12
TraesCS7B01G006600.1	Wheat	plastid	25.91	25.51

Protein Annotations

EnsemblPlants:TraesCS1B01G409300.1	EnsemblPlantsGene:TraesCS1B01G409300	Gene3D:3.10.20.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0009055	GO:GO:0051536	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:Beta-grasp_dom_sf	InterPro:IPR001041
InterPro:IPR012675	PANTHER:PTHR23426	PANTHER:PTHR23426:SF32	PFAM:PF00111	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF54292	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:636753327..636754469

Molecular Weight (calculated)

20349.4 Da

IEP (calculated)

7.964

GRAVY (calculated)

-0.238

Length

193 amino acids

Sequence
(BLAST)

001: MAATSSAALF SVLPLPTATP VSARAGSSLC RPTRSAAAVS PIRCSAASPD LSPGAPAPAP PKPQIELEFV GPKPGADGSY PVDRAAAVSG DKLLRDVMLE
101: NKLELYAAYG KLMNCGGGGS CGTCLVEIID GKELLSPRTD AENRYLKKKP ESWRLTCQTI VGNKENSGCR PTAAPVEEMT EQSCMHIRWT DRM

Best Arabidopsis Sequence Match ( AT4G32590.3 )
(BLAST)

001: MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKSALDIGCR AADSTVEEVN

Arabidopsis Description

2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.