Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039288_P001 | Maize | cytosol | 84.89 | 84.89 |
| Zm00001d048981_P001 | Maize | cytosol | 43.88 | 73.49 |
| Zm00001d041837_P001 | Maize | endoplasmic reticulum, extracellular | 49.64 | 50.37 |
| HORVU2Hr1G042420.1 | Barley | cytosol | 40.29 | 43.41 |
| KRH16041 | Soybean | plastid | 43.17 | 40.54 |
| PGSC0003DMT400003234 | Potato | cytosol, mitochondrion | 44.6 | 39.74 |
| KXG22507 | Sorghum | plastid | 49.64 | 38.33 |
| CDX68864 | Canola | plastid | 45.32 | 37.95 |
| KRH05069 | Soybean | plastid | 43.88 | 37.89 |
| Bra011358.1-P | Field mustard | plastid | 46.04 | 37.87 |
| CDX75257 | Canola | plastid | 46.04 | 37.87 |
| Zm00001d038946_P001 | Maize | plastid | 53.24 | 37.19 |
| VIT_04s0008g04240.t01 | Wine grape | extracellular | 45.32 | 36.63 |
| AT4G32590.3 | Thale cress | plastid | 46.04 | 35.56 |
| TraesCS1A01G383200.1 | Wheat | plastid | 46.04 | 35.56 |
| TraesCS1D01G391000.1 | Wheat | plastid | 46.04 | 35.16 |
| GSMUA_Achr1P14520_001 | Banana | plastid | 46.04 | 34.78 |
| Os05t0555300-01 | Rice | plastid | 51.8 | 34.29 |
| TraesCS1B01G409300.1 | Wheat | plastid | 44.6 | 32.12 |
| Zm00001d021515_P001 | Maize | plastid | 30.94 | 22.51 |
| HORVU1Hr1G084520.15 | Barley | nucleus | 35.25 | 21.97 |
| Zm00001d006398_P001 | Maize | plastid | 28.78 | 20.1 |
| Solyc08g022140.1.1 | Tomato | cytosol | 5.76 | 8.79 |
Protein Annotations
| InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | Gene3D:3.10.20.30 | MapMan:35.2 | UniProt:A0A1D6JN19 | InterPro:Beta-grasp_dom_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0051536 | InterPro:IPR001041 | InterPro:IPR012675 |
| ProteinID:ONL93437.1 | PFAM:PF00111 | PANTHER:PTHR23426 | PANTHER:PTHR23426:SF32 | SUPFAM:SSF54292 | UniParc:UPI000844F668 |
| EnsemblPlantsGene:Zm00001d027567 | EnsemblPlants:Zm00001d027567_P001 | EnsemblPlants:Zm00001d027567_T001 | SEG:seg | : | : |
Description
2Fe-2S ferredoxin-like superfamily protein
Coordinates
chr1:+:8234878..8235877
Molecular Weight (calculated)
15169.1 Da
IEP (calculated)
8.806
GRAVY (calculated)
-0.458
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MHCSGKGKPW DRLDAGKPCA LDHTWKAYDL YIGENDSSSA SASSGVVLLY RSQGKVMNCD GGGSCGTCIV EIIDGKELLN ERTSTENRYL KKKPDSWRLA
101: CQTIVGNKEN SGKASFILFP THPAINTSLP YALKKKVVQ
101: CQTIVGNKEN SGKASFILFP THPAINTSLP YALKKKVVQ
001: MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKSALDIGCR AADSTVEEVN
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKSALDIGCR AADSTVEEVN
Arabidopsis Description
2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUE0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.