Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003234 | Potato | cytosol, mitochondrion | 73.63 | 42.95 |
| KRH05069 | Soybean | plastid | 38.46 | 21.74 |
| CDX68864 | Canola | plastid | 39.56 | 21.69 |
| Bra011358.1-P | Field mustard | plastid | 39.56 | 21.3 |
| CDX75257 | Canola | plastid | 39.56 | 21.3 |
| VIT_04s0008g04240.t01 | Wine grape | extracellular | 39.56 | 20.93 |
| HORVU2Hr1G042420.1 | Barley | cytosol | 28.57 | 20.16 |
| KRH16041 | Soybean | plastid | 31.87 | 19.59 |
| TraesCS1A01G383200.1 | Wheat | plastid | 38.46 | 19.44 |
| TraesCS1D01G391000.1 | Wheat | plastid | 38.46 | 19.23 |
| GSMUA_Achr1P14520_001 | Banana | plastid | 38.46 | 19.02 |
| KXG22507 | Sorghum | plastid | 35.16 | 17.78 |
| AT4G32590.3 | Thale cress | plastid | 35.16 | 17.78 |
| TraesCS1B01G409300.1 | Wheat | plastid | 36.26 | 17.1 |
| Zm00001d038946_P001 | Maize | plastid | 36.26 | 16.58 |
| Os05t0555300-01 | Rice | plastid | 34.07 | 14.76 |
| HORVU1Hr1G084520.15 | Barley | nucleus | 29.67 | 12.11 |
| Zm00001d048981_P001 | Maize | cytosol | 9.89 | 10.84 |
| Zm00001d027567_P001 | Maize | cytosol | 8.79 | 5.76 |
| Solyc08g083360.2.1 | Tomato | nucleus | 12.09 | 5.73 |
| Zm00001d039288_P001 | Maize | cytosol | 7.69 | 5.04 |
| Zm00001d041837_P001 | Maize | endoplasmic reticulum, extracellular | 5.49 | 3.65 |
Protein Annotations
| EnsemblPlants:Solyc08g022140.1.1 | EnsemblPlantsGene:Solyc08g022140.1 | PANTHER:PTHR23426 | PANTHER:PTHR23426:SF32 | UniParc:UPI000276BA97 | UniProt:K4CJN4 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:31837257..31837605
Molecular Weight (calculated)
10330.5 Da
IEP (calculated)
8.717
GRAVY (calculated)
-0.342
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MVATITFRPQ ELTKKHHNPL TSVTKVIETS ICCTTTTKPK IEVEFIGSKP DENGNYPMDK TKAVSGEKML RNITSQNKIE LYAAYVIDFF F
001: MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA
101: AYVSYVDFSL FNYEI
101: AYVSYVDFSL FNYEI
Arabidopsis Description
2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUE0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.