Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048981_P001 | Maize | cytosol | 51.16 | 79.52 |
| TraesCS1A01G383200.1 | Wheat | plastid | 87.6 | 62.78 |
| TraesCS1D01G391000.1 | Wheat | plastid | 86.82 | 61.54 |
| KRH05069 | Soybean | plastid | 71.32 | 57.14 |
| PGSC0003DMT400003234 | Potato | cytosol, mitochondrion | 67.44 | 55.77 |
| KXG22507 | Sorghum | plastid | 77.52 | 55.56 |
| VIT_04s0008g04240.t01 | Wine grape | extracellular | 73.64 | 55.23 |
| KRH16041 | Soybean | plastid | 62.79 | 54.73 |
| CDX68864 | Canola | plastid | 68.99 | 53.61 |
| TraesCS1B01G409300.1 | Wheat | plastid | 79.07 | 52.85 |
| CDX75257 | Canola | plastid | 68.99 | 52.66 |
| Bra011358.1-P | Field mustard | plastid | 68.99 | 52.66 |
| GSMUA_Achr1P14520_001 | Banana | plastid | 71.32 | 50.0 |
| AT4G32590.3 | Thale cress | plastid | 66.67 | 47.78 |
| Zm00001d038946_P001 | Maize | plastid | 71.32 | 46.23 |
| Os05t0555300-01 | Rice | plastid | 69.77 | 42.86 |
| Zm00001d027567_P001 | Maize | cytosol | 43.41 | 40.29 |
| Zm00001d039288_P001 | Maize | cytosol | 41.09 | 38.13 |
| HORVU1Hr1G084520.15 | Barley | nucleus | 58.91 | 34.08 |
| Zm00001d041837_P001 | Maize | endoplasmic reticulum, extracellular | 31.01 | 29.2 |
| Solyc08g022140.1.1 | Tomato | cytosol | 20.16 | 28.57 |
| HORVU7Hr1G023140.1 | Barley | plastid | 39.53 | 25.89 |
Protein Annotations
| InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | Gene3D:3.10.20.30 | MapMan:35.1 | UniProt:A0A287HTP0 | InterPro:Beta-grasp_dom_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0051536 | EnsemblPlantsGene:HORVU2Hr1G042420 | EnsemblPlants:HORVU2Hr1G042420.1 |
| InterPro:IPR001041 | InterPro:IPR012675 | PFAM:PF00111 | PANTHER:PTHR23426 | PANTHER:PTHR23426:SF32 | SUPFAM:SSF54292 |
| UniParc:UPI000B4897C3 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:212924544..212925716
Molecular Weight (calculated)
14455.4 Da
IEP (calculated)
9.237
GRAVY (calculated)
-0.745
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: DPHRRAPAPP RPQIELEFLG PKPGTDGSYP VDRSAAVNSD KLLRDIMVEN KIELYATYRK LMNCSGGGSC GTCTVEIIDG KELLSPRTDA ENRYLKKKPE
101: SWRLTCQTIV GNKENSGKVV VQRLPEWKK
101: SWRLTCQTIV GNKENSGKVV VQRLPEWKK
001: MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKVVVQRIPQ WKK
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKVVVQRIPQ WKK
Arabidopsis Description
2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUE0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.