Factsheet for Os05t0555300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048981_P001	Maize	cytosol	32.86	83.13
HORVU2Hr1G042420.1	Barley	cytosol	42.86	69.77
KXG22507	Sorghum	plastid	57.14	66.67
TraesCS1A01G383200.1	Wheat	plastid	52.86	61.67
TraesCS1D01G391000.1	Wheat	plastid	52.86	60.99
KRH16041	Soybean	plastid	41.9	59.46
Zm00001d038946_P001	Maize	plastid	56.19	59.3
PGSC0003DMT400003234	Potato	cytosol, mitochondrion	43.81	58.97
CDX68864	Canola	plastid	45.71	57.83
KRH05069	Soybean	plastid	44.29	57.76
GSMUA_Achr1P14520_001	Banana	plastid	50.48	57.61
VIT_04s0008g04240.t01	Wine grape	extracellular	46.67	56.98
CDX75257	Canola	plastid	45.24	56.21
Bra011358.1-P	Field mustard	plastid	45.24	56.21
TraesCS1B01G409300.1	Wheat	plastid	49.52	53.89
AT4G32590.3	Thale cress	plastid	45.71	53.33
Zm00001d027567_P001	Maize	cytosol	34.29	51.8
Zm00001d039288_P001	Maize	cytosol	31.9	48.2
Zm00001d041837_P001	Maize	endoplasmic reticulum, extracellular	24.29	37.23
HORVU1Hr1G084520.15	Barley	nucleus	37.62	35.43
Solyc08g022140.1.1	Tomato	cytosol	14.76	34.07
Os07t0489800-01	Rice	plastid	27.62	27.62

Protein Annotations

InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	Gene3D:3.10.20.30	MapMan:35.1	EntrezGene:4339560	ProteinID:AAT58739.1
EMBL:AK062997	ProteinID:BAS95258.1	InterPro:Beta-grasp_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0022900
GO:GO:0051536	InterPro:IPR001041	InterPro:IPR012675	EnsemblPlantsGene:Os05g0555300	EnsemblPlants:Os05t0555300-01	PFAM:PF00111
PANTHER:PTHR23426	PANTHER:PTHR23426:SF32	UniProt:Q6I620	SUPFAM:SSF54292	UniParc:UPI00003B3398	RefSeq:XP_015638270.1
SEG:seg	:	:	:	:	:

Description

Similar to electron carrier/ electron transporter/ iron ion binding protein. (Os05t0555300-01);Beta-grasp fold, ferredoxin-type domain containing protein. (Os05t0555300-02)

Coordinates

chr5:-:27605989..27607548

Molecular Weight (calculated)

22404.5 Da

IEP (calculated)

8.737

GRAVY (calculated)

-0.360

Length

210 amino acids

Sequence
(BLAST)

001: MAATSSTSTA LFSLAIPSSR VVSTRGHRKA SSGSGPFRAA RIRCSNAASP NASAGAASAE EAAPPPKPQI DLEFVGPKAD ADGSFPVDRA AAGSGEKLLR
101: DVMVENKIEL YAAYGKVMNC GGGGSCGTCI VEIVDGKELL NERTNTENRY LKKKPESWRL ACQTIVGNKE NSGKYKTTSI PQERRVFSLM LITQNLAHEN
201: AFIHHDFSEI

Best Arabidopsis Sequence Match ( AT4G32590.1 )
(BLAST)

001: MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKVVVQRIPQ WKK

Arabidopsis Description

2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.