Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048981_P001 | Maize | cytosol | 31.39 | 51.81 |
| Zm00001d039288_P001 | Maize | cytosol | 50.37 | 49.64 |
| Zm00001d027567_P001 | Maize | cytosol | 50.37 | 49.64 |
| HORVU2Hr1G042420.1 | Barley | cytosol | 29.2 | 31.01 |
| KRH16041 | Soybean | plastid | 29.93 | 27.7 |
| PGSC0003DMT400003234 | Potato | cytosol, mitochondrion | 31.39 | 27.56 |
| KXG22507 | Sorghum | plastid | 35.77 | 27.22 |
| VIT_04s0008g04240.t01 | Wine grape | extracellular | 32.85 | 26.16 |
| Zm00001d038946_P001 | Maize | plastid | 37.96 | 26.13 |
| CDX68864 | Canola | plastid | 31.39 | 25.9 |
| KRH05069 | Soybean | plastid | 29.93 | 25.47 |
| Bra011358.1-P | Field mustard | plastid | 31.39 | 25.44 |
| CDX75257 | Canola | plastid | 31.39 | 25.44 |
| TraesCS1A01G383200.1 | Wheat | plastid | 32.85 | 25.0 |
| TraesCS1D01G391000.1 | Wheat | plastid | 32.85 | 24.73 |
| AT4G32590.3 | Thale cress | plastid | 32.12 | 24.44 |
| Os05t0555300-01 | Rice | plastid | 37.23 | 24.29 |
| GSMUA_Achr1P14520_001 | Banana | plastid | 32.12 | 23.91 |
| TraesCS1B01G409300.1 | Wheat | plastid | 32.12 | 22.8 |
| Zm00001d021515_P001 | Maize | plastid | 21.9 | 15.71 |
| Zm00001d006398_P001 | Maize | plastid | 20.44 | 14.07 |
| HORVU1Hr1G084520.15 | Barley | nucleus | 21.17 | 13.0 |
| Solyc08g022140.1.1 | Tomato | cytosol | 3.65 | 5.49 |
Protein Annotations
| EnsemblPlants:Zm00001d041837_P001 | EnsemblPlants:Zm00001d041837_T001 | EnsemblPlantsGene:Zm00001d041837 | PANTHER:PTHR23426 | PANTHER:PTHR23426:SF32 | ProteinID:ONM33800.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0008439B96 | UniProt:A0A1D6MYM5 | MapMan:35.2 | : |
Description
2Fe-2S ferredoxin-like superfamily protein
Coordinates
chr3:-:139954073..139954785
Molecular Weight (calculated)
15431.8 Da
IEP (calculated)
10.627
GRAVY (calculated)
-0.401
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MNENKIKLYA AYVGSAFLLL HLCCAVACLT KRGLAVSLAR QGDELRWRRK LWHLHRRGTS SPPQSTAPNI IDGKELLNER TSTENRYLKK KPDSWRLACQ
101: TIVGNKENSG KASFVLFPTH PAINTSLPYA LKNKVVQ
101: TIVGNKENSG KASFVLFPTH PAINTSLPYA LKNKVVQ
001: MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKSALDIGCR AADSTVEEVN
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKSALDIGCR AADSTVEEVN
Arabidopsis Description
2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUE0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.