Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75257 | Canola | plastid | 84.94 | 83.43 |
| Zm00001d048981_P001 | Maize | cytosol | 41.57 | 83.13 |
| HORVU2Hr1G042420.1 | Barley | cytosol | 53.61 | 68.99 |
| AT4G32590.3 | Thale cress | plastid | 72.29 | 66.67 |
| KRH16041 | Soybean | plastid | 58.43 | 65.54 |
| PGSC0003DMT400003234 | Potato | cytosol, mitochondrion | 59.04 | 62.82 |
| KRH05069 | Soybean | plastid | 60.24 | 62.11 |
| VIT_04s0008g04240.t01 | Wine grape | extracellular | 63.86 | 61.63 |
| KXG22507 | Sorghum | plastid | 63.25 | 58.33 |
| GSMUA_Achr1P14520_001 | Banana | plastid | 62.65 | 56.52 |
| TraesCS1A01G383200.1 | Wheat | plastid | 60.24 | 55.56 |
| TraesCS1D01G391000.1 | Wheat | plastid | 60.84 | 55.49 |
| Zm00001d038946_P001 | Maize | plastid | 56.63 | 47.24 |
| TraesCS1B01G409300.1 | Wheat | plastid | 53.61 | 46.11 |
| Os05t0555300-01 | Rice | plastid | 57.83 | 45.71 |
| Zm00001d027567_P001 | Maize | cytosol | 37.95 | 45.32 |
| Zm00001d039288_P001 | Maize | cytosol | 37.35 | 44.6 |
| Solyc08g022140.1.1 | Tomato | cytosol | 21.69 | 39.56 |
| CDY30147 | Canola | mitochondrion | 22.89 | 38.0 |
| CDY63822 | Canola | cytosol | 25.3 | 36.52 |
| Zm00001d041837_P001 | Maize | endoplasmic reticulum, extracellular | 25.9 | 31.39 |
| HORVU1Hr1G084520.15 | Barley | nucleus | 38.55 | 28.7 |
| CDX97734 | Canola | plastid | 34.34 | 27.94 |
| CDY20191 | Canola | plastid | 33.73 | 27.45 |
| CDY30148 | Canola | plastid | 15.66 | 18.18 |
Protein Annotations
| EnsemblPlants:CDX68864 | EnsemblPlantsGene:GSBRNA2T00130589001 | Gene3D:3.10.20.30 | GO:A0A078BY68 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0009055 | GO:GO:0051536 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:Beta-grasp_dom_sf |
| InterPro:IPR001041 | InterPro:IPR012675 | PANTHER:PTHR23426 | PANTHER:PTHR23426:SF32 | PFAM:PF00111 | ProteinID:CDX68864 |
| ProteinID:CDX68864.1 | SEG:seg | SUPFAM:SSF54292 | UniParc:UPI0004EE9CA2 | MapMan:35.1 | : |
Description
BnaC01g05890D
Coordinates
chrLK031789:+:1631943..1633881
Molecular Weight (calculated)
18073.6 Da
IEP (calculated)
9.718
GRAVY (calculated)
-0.528
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLGFNLGF SFSGVKNRQV SVNGRARVIS CCSSSSSEAS QQGISTTKPP PEIELEFFGP KPGSDGTYPR DKAKAVSGEK LLRSIMQDSK IELYATYGKV
101: MNCGGGGSCG TCIILDGREL LNERTDTENK YLKKKPESWR LACQTIVGNK ENSGKVVVQR IPQWKK
101: MNCGGGGSCG TCIILDGREL LNERTDTENK YLKKKPESWR LACQTIVGNK ENSGKVVVQR IPQWKK
001: MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKVVVQRIPQ WKK
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKVVVQRIPQ WKK
Arabidopsis Description
2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUE0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.