Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G042420.1 | Barley | cytosol | 34.08 | 58.91 |
| Zm00001d048981_P001 | Maize | cytosol | 20.63 | 55.42 |
| TraesCS1A01G383200.1 | Wheat | plastid | 39.91 | 49.44 |
| TraesCS1D01G391000.1 | Wheat | plastid | 39.91 | 48.9 |
| TraesCS1B01G409300.1 | Wheat | plastid | 41.7 | 48.19 |
| KXG22507 | Sorghum | plastid | 35.87 | 44.44 |
| KRH05069 | Soybean | plastid | 30.94 | 42.86 |
| VIT_04s0008g04240.t01 | Wine grape | extracellular | 31.39 | 40.7 |
| PGSC0003DMT400003234 | Potato | cytosol, mitochondrion | 28.25 | 40.38 |
| GSMUA_Achr1P14520_001 | Banana | plastid | 31.84 | 38.59 |
| CDX68864 | Canola | plastid | 28.7 | 38.55 |
| Zm00001d038946_P001 | Maize | plastid | 34.08 | 38.19 |
| KRH16041 | Soybean | plastid | 25.11 | 37.84 |
| Os05t0555300-01 | Rice | plastid | 35.43 | 37.62 |
| CDX75257 | Canola | plastid | 28.25 | 37.28 |
| Bra011358.1-P | Field mustard | plastid | 28.25 | 37.28 |
| AT4G32590.3 | Thale cress | plastid | 30.04 | 37.22 |
| Zm00001d027567_P001 | Maize | cytosol | 21.97 | 35.25 |
| Zm00001d039288_P001 | Maize | cytosol | 21.52 | 34.53 |
| Solyc08g022140.1.1 | Tomato | cytosol | 12.11 | 29.67 |
| Zm00001d041837_P001 | Maize | endoplasmic reticulum, extracellular | 13.0 | 21.17 |
| HORVU7Hr1G023140.1 | Barley | plastid | 18.39 | 20.81 |
Protein Annotations
| InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | Gene3D:3.10.20.30 | MapMan:35.2 | UniProt:A0A287GJW9 | InterPro:Beta-grasp_dom_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0051536 | EnsemblPlantsGene:HORVU1Hr1G084520 | EnsemblPlants:HORVU1Hr1G084520.15 |
| InterPro:IPR001041 | InterPro:IPR012675 | PFAM:PF00111 | PANTHER:PTHR23426 | PANTHER:PTHR23426:SF32 | SUPFAM:SSF54292 |
| UniParc:UPI000B469194 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:534125572..534126958
Molecular Weight (calculated)
24163.0 Da
IEP (calculated)
9.829
GRAVY (calculated)
-0.732
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: HVPNQEQREH GGHELRLRGA LLPPPLPHIH PGLRAGRRQP LQAHALGRGR VPPSDAPPPR PTCRPALRRR RRPGPKSSSS SSGPKPGADG SYPVDRAAAV
101: SGDKLLRDVM VENKIELYAL QGKLMNCGGG GSCGTCIVEI IDGKELLSPR TDAENRYLKK ETGVVEADLP DDRRKQGELR QGRRPTAAAV EEMSEQSCMH
201: IGCSVLTACD RSNAMYVPPA RKC
101: SGDKLLRDVM VENKIELYAL QGKLMNCGGG GSCGTCIVEI IDGKELLSPR TDAENRYLKK ETGVVEADLP DDRRKQGELR QGRRPTAAAV EEMSEQSCMH
201: IGCSVLTACD RSNAMYVPPA RKC
001: MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KAKAGILETR MSNNSREQRK LRKGCRAADS TVEEVN
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KAKAGILETR MSNNSREQRK LRKGCRAADS TVEEVN
Arabidopsis Description
2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUE0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.