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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d048981_P001 Maize cytosol 43.89 95.18
HORVU2Hr1G042420.1 Barley cytosol 55.56 77.52
TraesCS1A01G383200.1 Wheat plastid 67.22 67.22
TraesCS1D01G391000.1 Wheat plastid 67.22 66.48
Zm00001d038946_P001 Maize plastid 72.78 65.83
PGSC0003DMT400003234 Potato cytosol, mitochondrion 56.11 64.74
CDX75257 Canola plastid 60.0 63.91
Bra011358.1-P Field mustard plastid 60.0 63.91
CDX68864 Canola plastid 58.33 63.25
KRH16041 Soybean plastid 51.67 62.84
KRH05069 Soybean plastid 56.11 62.73
VIT_04s0008g04240.t01 Wine grape extracellular 58.89 61.63
TraesCS1B01G409300.1 Wheat plastid 63.89 59.59
GSMUA_Achr1P14520_001 Banana plastid 59.44 58.15
Os05t0555300-01 Rice plastid 66.67 57.14
AT4G32590.3 Thale cress plastid 55.56 55.56
Zm00001d027567_P001 Maize cytosol 38.33 49.64
Zm00001d039288_P001 Maize cytosol 36.67 47.48
HORVU1Hr1G084520.15 Barley nucleus 44.44 35.87
Zm00001d041837_P001 Maize endoplasmic reticulum, extracellular 27.22 35.77
Solyc08g022140.1.1 Tomato cytosol 17.78 35.16
EER97233 Sorghum plastid 29.44 27.18
Protein Annotations
InterPro:2Fe-2S_ferredoxin-like_sfInterPro:2Fe-2S_ferredoxin-typeGene3D:3.10.20.30MapMan:35.1UniProt:A0A1B6PA15InterPro:Beta-grasp_dom_sf
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0006091GO:GO:0008150GO:GO:0008152
GO:GO:0009055GO:GO:0009987GO:GO:0022900GO:GO:0051536InterPro:IPR001041InterPro:IPR012675
EnsemblPlants:KXG22507ProteinID:KXG22507ProteinID:KXG22507.1PFAM:PF00111PANTHER:PTHR23426PANTHER:PTHR23426:SF32
EnsemblPlantsGene:SORBI_3009G225600SUPFAM:SSF54292UniParc:UPI0003C6A01D:::
Description
hypothetical protein
Coordinates
chr9:-:56745759..56747418
Molecular Weight (calculated)
19019.7 Da
IEP (calculated)
9.828
GRAVY (calculated)
-0.413
Length
180 amino acids
Sequence
(BLAST)
001: MAATSSACGA LASLPFAAST SASPRVSGSG HRGPRRFRAG TVRCSSASPN VSQGAPAPAL PKPQIELEFV GPKPGADGSF PVDRAEAASG EKLLRDIMNE
101: NKIELYAAYG KVMNCGGGGS CGTCIVEIID GKELLNERTN TENRYLKKKP DSWRLACQTI VGNKENSGKV VVQRLPQWKK
Best Arabidopsis Sequence Match ( AT4G32590.1 )
(BLAST)
001: MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKVVVQRIPQ WKK
Arabidopsis Description
2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUE0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.