Factsheet for GSMUA_Achr4P05470_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073716	Potato	cytosol	18.46	78.07
EES15173	Sorghum	plastid	90.25	73.6
Os08t0559600-01	Rice	plastid	89.83	72.9
Zm00001d049929_P002	Maize	plastid	90.04	72.09
TraesCS7D01G279300.1	Wheat	plastid	88.8	72.05
TraesCS7B01G180500.1	Wheat	plastid	88.38	71.72
TraesCS7A01G280700.1	Wheat	plastid	88.17	71.55
Zm00001d031929_P005	Maize	plastid	90.04	70.92
HORVU7Hr1G059460.4	Barley	mitochondrion, peroxisome, plastid	88.59	70.7
PGSC0003DMT400049308	Potato	plastid	86.72	68.41
Solyc05g053540.2.1	Tomato	endoplasmic reticulum, nucleus, plastid	86.72	68.41
KRH20898	Soybean	nucleus	85.27	68.39
VIT_05s0051g00830.t01	Wine grape	plastid	86.1	68.03
Solyc12g043020.1.1	Tomato	plastid	86.72	67.97
CDY46350	Canola	plastid	81.95	65.29
AT3G23940.1	Thale cress	plastid	82.16	65.13
Bra028367.1-P	Field mustard	plastid	82.16	65.02
CDY18059	Canola	plastid	82.16	65.02
Bra015023.1-P	Field mustard	plastid	81.95	64.65
CDX77443	Canola	plastid	81.95	64.65
CDY45563	Canola	plastid	81.74	64.48

Protein Annotations

KEGG:00290+4.2.1.9	KEGG:00770+4.2.1.9	Gene3D:3.50.30.80	MapMan:4.1.2.2.8.5	MapMan:4.1.3.2.3	InterPro:DiOHA_6PGluconate_deHydtase
InterPro:DiOHA_6PGluconate_deHydtase_CS	InterPro:DihydroxyA_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004160	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009082	GO:GO:0009507
GO:GO:0009536	GO:GO:0009553	GO:GO:0009555	GO:GO:0009570	GO:GO:0009628	GO:GO:0009651
GO:GO:0009987	GO:GO:0048364	EnsemblPlantsGene:GSMUA_Achr4G05470_001	EnsemblPlants:GSMUA_Achr4P05470_001	EnsemblPlants:GSMUA_Achr4T05470_001	InterPro:IlvD/EDD_N
UniProt:M0SLB4	PFAM:PF00920	ScanProsite:PS00886	ScanProsite:PS00887	PANTHER:PTHR21000	PANTHER:PTHR21000:SF17
SUPFAM:SSF143975	SUPFAM:SSF52016	TIGRFAMs:TIGR00110	UniParc:UPI00029520A4	SEG:seg	:

Description

Dihydroxy-acid dehydratase [Source:GMGC_GENE;Acc:GSMUA_Achr4G05470_001]

Coordinates

chr4:+:4207853..4215629

Molecular Weight (calculated)

51235.3 Da

IEP (calculated)

5.708

GRAVY (calculated)

0.005

Length

482 amino acids

Sequence
(BLAST)

001: MRKPQVGVSS VCDAISMGTR GMCYSLQSRD LIADSIETVM AAQWYDANIS IPGCDKNMPG TIMAMGRLNR PSIMIYGGTI KPGHFQGNSY DIVSAFQCYG
101: EYVSGSINDD ERMNVVRNSC PGAGACGGMY TANTMASAIE TMGMSLPYSS STPAEDPLKL EECRLAGKYL LELLKMDLKP CDIITEKSLR NAMVVVMALG
201: GSTNAVLHLI AIARSVGLHL TLDDFQKVSD QVPFLADLKP SGKYIGGTPG VIRFLLEEGF LDGDCITVTG KTLAENAKLF PALSEGQQII RPLSNPIKAT
301: GHIQILYGNL APEGSVAKIT GKEGLFFSGP ALVFEGEESM IAAISENPMN FKGKVVVIRG EGPKGGPGMP EMLTPTSAIM GAGLGKECAL LTDGRFSGGS
401: HGYVVGHICP EAQAGGPIGL IQNGDIITID VVKRRMDVHL TEEQLAERSN NWSPPPLKAT RGVLLKYIKN VQPASSGCVT DE

Best Arabidopsis Sequence Match ( AT3G23940.1 )
(BLAST)

001: MQATIFSPRA TLFPCKPLLP SHNVNSRRPS IISCSAQSVT ADPSPPITDT NKLNKYSSRI TEPKSQGGSQ AILHGVGLSD DDLLKPQIGI SSVWYEGNTC
101: NMHLLKLSEA VKEGVENAGM VGFRFNTIGV SDAISMGTRG MCFSLQSRDL IADSIETVMS AQWYDGNISI PGCDKNMPGT IMAMGRLNRP GIMVYGGTIK
201: PGHFQDKTYD IVSAFQSYGE FVSGSISDEQ RKTVLHHSCP GAGACGGMYT ANTMASAIEA MGMSLPYSSS IPAEDPLKLD ECRLAGKYLL ELLKMDLKPR
301: DIITPKSLRN AMVSVMALGG STNAVLHLIA IARSVGLELT LDDFQKVSDA VPFLADLKPS GKYVMEDIHK IGGTPAVLRY LLELGLMDGD CMTVTGQTLA
401: QNLENVPSLT EGQEIIRPLS NPIKETGHIQ ILRGDLAPDG SVAKITGKEG LYFSGPALVF EGEESMLAAI SADPMSFKGT VVVIRGEGPK GGPGMPEMLT
501: PTSAIMGAGL GKECALLTDG RFSGGSHGFV VGHICPEAQE GGPIGLIKNG DIITIDIGKK RIDTQVSPEE MNDRRKKWTA PAYKVNRGVL YKYIKNVQSA
601: SDGCVTDE

Arabidopsis Description

DHADDihydroxy-acid dehydratase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.