Factsheet for Zm00001d049929_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d038652_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23940.1	Zm00001d038652_P003	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15173	Sorghum	plastid	96.35	98.14
Zm00001d031929_P005	Maize	plastid	96.01	94.44
Os08t0559600-01	Rice	plastid	92.69	93.94
TraesCS7D01G279300.1	Wheat	plastid	91.2	92.42
TraesCS7A01G280700.1	Wheat	plastid	91.03	92.26
TraesCS7B01G180500.1	Wheat	plastid	90.86	92.09
GSMUA_Achr4P05470_001	Banana	cytosol, mitochondrion, plastid	72.09	90.04
HORVU7Hr1G059460.4	Barley	mitochondrion, peroxisome, plastid	88.21	87.91
KRH20898	Soybean	nucleus	80.07	80.2
PGSC0003DMT400049308	Potato	plastid	80.07	78.89
Solyc05g053540.2.1	Tomato	endoplasmic reticulum, nucleus, plastid	80.07	78.89
Solyc12g043020.1.1	Tomato	plastid	79.57	77.89
VIT_05s0051g00830.t01	Wine grape	plastid	77.91	76.89
AT3G23940.1	Thale cress	plastid	77.08	76.32
CDY46350	Canola	plastid	76.41	76.03
CDY18059	Canola	plastid	76.58	75.7
Bra028367.1-P	Field mustard	plastid	76.41	75.53
CDY45563	Canola	plastid	76.25	75.12
CDX77443	Canola	plastid	76.25	75.12
Bra015023.1-P	Field mustard	plastid	76.25	75.12
PGSC0003DMT400073716	Potato	cytosol	14.12	74.56

Protein Annotations

KEGG:00290+4.2.1.9	KEGG:00770+4.2.1.9	EntrezGene:100384514	Gene3D:3.50.30.80	MapMan:4.1.2.2.8.5	MapMan:4.1.3.2.3
UniProt:A0A1D6PYS2	ProteinID:AQK51595.1	InterPro:DiOHA_6PGluconate_deHydtase	InterPro:DiOHA_6PGluconate_deHydtase_CS	InterPro:DihydroxyA_deHydtase	GO:GO:0003674
GO:GO:0003824	GO:GO:0004160	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009082
GO:GO:0009987	InterPro:IlvD/EDD_N	HAMAP:MF_00012	PFAM:PF00920	ScanProsite:PS00886	ScanProsite:PS00887
PANTHER:PTHR21000	PANTHER:PTHR21000:SF17	SUPFAM:SSF143975	SUPFAM:SSF52016	TIGRFAMs:TIGR00110	UniParc:UPI00084240B5
EnsemblPlantsGene:Zm00001d049929	EnsemblPlants:Zm00001d049929_P002	EnsemblPlants:Zm00001d049929_T002	SEG:seg	:	:

Description

Dihydroxy-acid dehydratase chloroplastic

Coordinates

chr4:-:53637973..53643335

Molecular Weight (calculated)

64605.3 Da

IEP (calculated)

7.475

GRAVY (calculated)

-0.105

Length

602 amino acids

Sequence
(BLAST)

001: MQSMAPTSPS LPVAGPVPRR RLQRVRAAAV SDEPKLNKYS ARITEPKSQG ASQAVLYGVG LTDADLRKPQ VGVSSVWYEG NTCNMHLLRL AEAVRDGVRE
101: AGMVGFRFNT VGVSDAISMG TRGMCYSLQS RDLIADSIET VMGAQHYDAN ISIPGCDKNM PGTIMAMGRL NRPSIMIYGG TIKPGHFQGN SYDIVSAFQC
201: YGEYVSGSIT DEQRKNVLRN SCPGAGACGG MYTANTMASA IETLGMSLPY SSSTPAEDPL KLEECRLAGK YLLELLKMDL KPKDIITEKS LRNAMVIVMA
301: LGGSTNAVLH LIAIARLIKA HWLSSFRSVG LHLTLDDFQK VSDQVPFLAD LKPSGKYVME DLHKIGGTPA VIHYLLEQGL LDGDCMTVTA KTLAENAKIF
401: PPLSEGQQII RPLDNPIKPT GHIQILYGNL APEGSVAKIT GKEGLYFSGP ALVFEGEESM ITAISENPAN FKGKVVVIRG EGPKGGPGMP EMLTPTSAIM
501: GAGLGKECAL LTDGRFSGGS HGFVVGHICP EAQEGGPIGL VQSGDIITID VSKRVIDVDL TEQQLEERRR KWTPPPYKST SGALWKYIKL VAPASRGCVT
601: DE

Best Arabidopsis Sequence Match ( AT3G23940.1 )
(BLAST)

001: MQATIFSPRA TLFPCKPLLP SHNVNSRRPS IISCSAQSVT ADPSPPITDT NKLNKYSSRI TEPKSQGGSQ AILHGVGLSD DDLLKPQIGI SSVWYEGNTC
101: NMHLLKLSEA VKEGVENAGM VGFRFNTIGV SDAISMGTRG MCFSLQSRDL IADSIETVMS AQWYDGNISI PGCDKNMPGT IMAMGRLNRP GIMVYGGTIK
201: PGHFQDKTYD IVSAFQSYGE FVSGSISDEQ RKTVLHHSCP GAGACGGMYT ANTMASAIEA MGMSLPYSSS IPAEDPLKLD ECRLAGKYLL ELLKMDLKPR
301: DIITPKSLRN AMVSVMALGG STNAVLHLIA IARSVGLELT LDDFQKVSDA VPFLADLKPS GKYVMEDIHK IGGTPAVLRY LLELGLMDGD CMTVTGQTLA
401: QNLENVPSLT EGQEIIRPLS NPIKETGHIQ ILRGDLAPDG SVAKITGKEG LYFSGPALVF EGEESMLAAI SADPMSFKGT VVVIRGEGPK GGPGMPEMLT
501: PTSAIMGAGL GKECALLTDG RFSGGSHGFV VGHICPEAQE GGPIGLIKNG DIITIDIGKK RIDTQVSPEE MNDRRKKWTA PAYKVNRGVL YKYIKNVQSA
601: SDGCVTDE

Arabidopsis Description

DHADDihydroxy-acid dehydratase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.