Factsheet for Os08t0559600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 6

Predictors

GFP

MS/MS

Papers

plastid: 17189339

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15173	Sorghum	plastid	94.78	95.26
TraesCS7D01G279300.1	Wheat	plastid	93.1	93.1
TraesCS7A01G280700.1	Wheat	plastid	92.93	92.93
TraesCS7B01G180500.1	Wheat	plastid	92.76	92.76
Zm00001d049929_P002	Maize	plastid	93.94	92.69
Zm00001d031929_P005	Maize	plastid	94.28	91.5
GSMUA_Achr4P05470_001	Banana	cytosol, mitochondrion, plastid	72.9	89.83
HORVU7Hr1G059460.4	Barley	mitochondrion, peroxisome, plastid	89.73	88.25
KRH20898	Soybean	nucleus	81.14	80.2
PGSC0003DMT400049308	Potato	plastid	81.31	79.05
Solyc05g053540.2.1	Tomato	endoplasmic reticulum, nucleus, plastid	81.31	79.05
Solyc12g043020.1.1	Tomato	plastid	80.81	78.05
VIT_05s0051g00830.t01	Wine grape	plastid	78.96	76.89
CDY46350	Canola	plastid	78.11	76.69
AT3G23940.1	Thale cress	plastid	78.45	76.64
CDY18059	Canola	plastid	78.28	76.35
Bra028367.1-P	Field mustard	plastid	78.11	76.19
CDY45563	Canola	plastid	78.11	75.94
CDX77443	Canola	plastid	78.11	75.94
Bra015023.1-P	Field mustard	plastid	78.11	75.94
PGSC0003DMT400073716	Potato	cytosol	14.31	74.56

Protein Annotations

KEGG:00290+4.2.1.9	KEGG:00770+4.2.1.9	Gene3D:3.50.30.80	MapMan:4.1.2.2.8.5	MapMan:4.1.3.2.3	EntrezGene:4346318
EMBL:AK102083	EMBL:AK103178	ProteinID:BAD13139.1	ProteinID:BAF24417.1	ProteinID:BAT06689.1	InterPro:DiOHA_6PGluconate_deHydtase
InterPro:DiOHA_6PGluconate_deHydtase_CS	InterPro:DihydroxyA_deHydtase	ProteinID:EAZ43653.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004160
GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009082
GO:GO:0009507	GO:GO:0009536	GO:GO:0009553	GO:GO:0009555	GO:GO:0009570	GO:GO:0009628
GO:GO:0009651	GO:GO:0009987	GO:GO:0048364	InterPro:IlvD/EDD_N	HAMAP:MF_00012	EnsemblPlantsGene:Os08g0559600
EnsemblPlants:Os08t0559600-01	PFAM:PF00920	ScanProsite:PS00886	ScanProsite:PS00887	PANTHER:PTHR21000	PANTHER:PTHR21000:SF17
UniProt:Q6YZH8	SUPFAM:SSF143975	SUPFAM:SSF52016	TIGRFAMs:TIGR00110	UniParc:UPI000023B0C0	RefSeq:XP_015649747.1
SEG:seg	:	:	:	:	:

Description

dihydroxy-acid dehydrataseSimilar to Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD). (Os08t0559600-01);Similar to Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD). (Os08t0559600-02)

Coordinates

chr8:+:28004856..28009273

Molecular Weight (calculated)

63654.1 Da

IEP (calculated)

7.454

GRAVY (calculated)

-0.132

Length

594 amino acids

Sequence
(BLAST)

001: MQSLALTSPS LPAPATASGR RRRRLERIRA TAVSDEPKLN KYSARITEPK SQGASQAVLY GVGLTDADLR KPQVGVSSVW YEGNTCNMHL LRLAEAVRDG
101: VREAGMVAFR FNTVGVSDAI SMGTRGMCYS LQSRDLIADS IETVMGAQHY DANISIPGCD KNMPGTIMAM GRLNRPSIMI YGGTIKPGHF QGNSYDIVSA
201: FQCYGEFVTG SISDEQRKNV LRNSCPGAGA CGGMYTANTM ASAIETMGMS LPYSSSTPAE DPLKLEECRL AGKYLLELLK MDLKPKDIIT EKSLRNAMVI
301: VMALGGSTNA VLHLIAIARS VGLQLTLDDF QKVSDQVPFL ADLKPSGKYV MEDLHKIGGT PAVIHYLLEQ GLLDGDCMTV TGKTLAENAK IFPPLSEGQQ
401: IIRPLDNPIK STGHIQILYG NLAPEGSVAK ITGKEGMFFS GPALVFEGEE SMITAISENP ANFKGKVVVI RGEGPKGGPG MPEMLTPTSA IMGAGLGKEC
501: ALLTDGRFSG GSHGFVVGHI CPEAQEGGPI GLVQNGDKIT IDVVKRVIDV ELTEAELEER RRKWTPPPHK AARGALWKYT KLVSPASRGC VTDE

Best Arabidopsis Sequence Match ( AT3G23940.1 )
(BLAST)

001: MQATIFSPRA TLFPCKPLLP SHNVNSRRPS IISCSAQSVT ADPSPPITDT NKLNKYSSRI TEPKSQGGSQ AILHGVGLSD DDLLKPQIGI SSVWYEGNTC
101: NMHLLKLSEA VKEGVENAGM VGFRFNTIGV SDAISMGTRG MCFSLQSRDL IADSIETVMS AQWYDGNISI PGCDKNMPGT IMAMGRLNRP GIMVYGGTIK
201: PGHFQDKTYD IVSAFQSYGE FVSGSISDEQ RKTVLHHSCP GAGACGGMYT ANTMASAIEA MGMSLPYSSS IPAEDPLKLD ECRLAGKYLL ELLKMDLKPR
301: DIITPKSLRN AMVSVMALGG STNAVLHLIA IARSVGLELT LDDFQKVSDA VPFLADLKPS GKYVMEDIHK IGGTPAVLRY LLELGLMDGD CMTVTGQTLA
401: QNLENVPSLT EGQEIIRPLS NPIKETGHIQ ILRGDLAPDG SVAKITGKEG LYFSGPALVF EGEESMLAAI SADPMSFKGT VVVIRGEGPK GGPGMPEMLT
501: PTSAIMGAGL GKECALLTDG RFSGGSHGFV VGHICPEAQE GGPIGLIKNG DIITIDIGKK RIDTQVSPEE MNDRRKKWTA PAYKVNRGVL YKYIKNVQSA
601: SDGCVTDE

Arabidopsis Description

DHADDihydroxy-acid dehydratase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.