Factsheet for HORVU7Hr1G059460.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:

plastid 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
TargetP:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075560.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23940.1	HORVU1Hr1G075560.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G180500.1	Wheat	plastid	93.71	95.29
TraesCS7D01G279300.1	Wheat	plastid	93.54	95.12
TraesCS7A01G280700.1	Wheat	plastid	93.21	94.78
Os08t0559600-01	Rice	plastid	88.25	89.73
EES15173	Sorghum	plastid	87.75	89.68
GSMUA_Achr4P05470_001	Banana	cytosol, mitochondrion, plastid	70.7	88.59
Zm00001d049929_P002	Maize	plastid	87.91	88.21
Zm00001d031929_P005	Maize	plastid	87.58	86.44
KRH20898	Soybean	nucleus	78.15	78.54
PGSC0003DMT400049308	Potato	plastid	77.81	76.92
Solyc05g053540.2.1	Tomato	endoplasmic reticulum, nucleus, plastid	77.65	76.76
Solyc12g043020.1.1	Tomato	plastid	77.81	76.42
VIT_05s0051g00830.t01	Wine grape	plastid	77.15	76.39
AT3G23940.1	Thale cress	plastid	76.49	75.99
CDY46350	Canola	plastid	75.99	75.87
CDY18059	Canola	plastid	76.16	75.53
Bra028367.1-P	Field mustard	plastid	75.99	75.37
CDX77443	Canola	plastid	76.16	75.29
Bra015023.1-P	Field mustard	plastid	76.16	75.29
CDY45563	Canola	plastid	75.99	75.12
PGSC0003DMT400073716	Potato	cytosol	13.74	72.81

Protein Annotations

KEGG:00290+4.2.1.9	KEGG:00770+4.2.1.9	Gene3D:3.50.30.80	MapMan:4.1.2.2.8.5	MapMan:4.1.3.2.3	UniProt:A0A287WNL3
InterPro:DiOHA_6PGluconate_deHydtase	InterPro:DiOHA_6PGluconate_deHydtase_CS	InterPro:DihydroxyA_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004160
GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009082
GO:GO:0009507	GO:GO:0009536	GO:GO:0009553	GO:GO:0009555	GO:GO:0009570	GO:GO:0009628
GO:GO:0009651	GO:GO:0009987	GO:GO:0048364	EnsemblPlantsGene:HORVU7Hr1G059460	EnsemblPlants:HORVU7Hr1G059460.4	InterPro:IlvD/EDD_N
HAMAP:MF_00012	PFAM:PF00920	ScanProsite:PS00886	ScanProsite:PS00887	PANTHER:PTHR21000	PANTHER:PTHR21000:SF17
SUPFAM:SSF143975	SUPFAM:SSF52016	TIGRFAMs:TIGR00110	UniParc:UPI000B47C7CE	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:-:267850387..267855483

Molecular Weight (calculated)

61658.3 Da

IEP (calculated)

6.203

GRAVY (calculated)

-0.097

Length

604 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXPASG RRLATRVRAA SAVSDEPKLN KYSARITEPK SQGASQAVLY GVGLTDADLR KPQVGVSSVW YEGNTCNMHL
101: LQLAEAVRDG IRDAGMVAFR FNTVGVSDAI SMGTRGMCYS LQSRDLIADS IETVMGAQHY DANISIPGCD KNMPGTIMAM GRLNRPSIMV YGGTIKPGHF
201: QGNSYDIVSA FQSYGEFVSG SISDEERKNV LRNSCPGAGA CGGMYTANTM ASAIETMGMS LPYSSSTPAE DSLKLDECRL AGKYLLELLK MDLKPRDIIT
301: EKSLRNAMVI IMALGGSTNA VLHLIAIARS VGLQLTLDDF QKVSDQVPFL ADLKPSGKYV MEDLHKIGGT PAVIHYLLEQ GLLDGDCMTV TGKTLAENAK
401: IFPPLSEGQQ IIRRLDNPIK STGHIQILYG NLAPEGSVAK ITGKEGLFFS GPALVFEGEE SMITAISENP ANFKGKVVVI RGEGPKGGPG MPEMLTPTSA
501: IMGAGLGKEC ALLTDGRFSG GSHGFVVGHV CPEAQEGGPI GLVEDGDTIT IDVVKKVIDV DLTEDQLEQR RRKWSPPPHK VTSGALWKYI KLVSSASSGC
601: VTDE

Best Arabidopsis Sequence Match ( AT3G23940.1 )
(BLAST)

001: MQATIFSPRA TLFPCKPLLP SHNVNSRRPS IISCSAQSVT ADPSPPITDT NKLNKYSSRI TEPKSQGGSQ AILHGVGLSD DDLLKPQIGI SSVWYEGNTC
101: NMHLLKLSEA VKEGVENAGM VGFRFNTIGV SDAISMGTRG MCFSLQSRDL IADSIETVMS AQWYDGNISI PGCDKNMPGT IMAMGRLNRP GIMVYGGTIK
201: PGHFQDKTYD IVSAFQSYGE FVSGSISDEQ RKTVLHHSCP GAGACGGMYT ANTMASAIEA MGMSLPYSSS IPAEDPLKLD ECRLAGKYLL ELLKMDLKPR
301: DIITPKSLRN AMVSVMALGG STNAVLHLIA IARSVGLELT LDDFQKVSDA VPFLADLKPS GKYVMEDIHK IGGTPAVLRY LLELGLMDGD CMTVTGQTLA
401: QNLENVPSLT EGQEIIRPLS NPIKETGHIQ ILRGDLAPDG SVAKITGKEG LYFSGPALVF EGEESMLAAI SADPMSFKGT VVVIRGEGPK GGPGMPEMLT
501: PTSAIMGAGL GKECALLTDG RFSGGSHGFV VGHICPEAQE GGPIGLIKNG DIITIDIGKK RIDTQVSPEE MNDRRKKWTA PAYKVNRGVL YKYIKNVQSA
601: SDGCVTDE

Arabidopsis Description

DHADDihydroxy-acid dehydratase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.