Factsheet for Zm00001d031929_P005

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d038652_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23940.1	Zm00001d038652_P003	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15173	Sorghum	plastid	95.1	98.48
Zm00001d049929_P002	Maize	plastid	94.44	96.01
Os08t0559600-01	Rice	plastid	91.5	94.28
TraesCS7D01G279300.1	Wheat	plastid	89.22	91.92
TraesCS7A01G280700.1	Wheat	plastid	89.05	91.75
TraesCS7B01G180500.1	Wheat	plastid	88.89	91.58
GSMUA_Achr4P05470_001	Banana	cytosol, mitochondrion, plastid	70.92	90.04
HORVU7Hr1G059460.4	Barley	mitochondrion, peroxisome, plastid	86.44	87.58
KRH20898	Soybean	nucleus	78.76	80.2
PGSC0003DMT400049308	Potato	plastid	78.59	78.72
Solyc05g053540.2.1	Tomato	endoplasmic reticulum, nucleus, plastid	78.59	78.72
Solyc12g043020.1.1	Tomato	plastid	77.94	77.56
VIT_05s0051g00830.t01	Wine grape	plastid	76.14	76.39
AT3G23940.1	Thale cress	plastid	75.33	75.82
CDY46350	Canola	plastid	74.84	75.7
CDY18059	Canola	plastid	75.0	75.37
Bra028367.1-P	Field mustard	plastid	74.84	75.21
CDY45563	Canola	plastid	74.84	74.96
CDX77443	Canola	plastid	74.84	74.96
Bra015023.1-P	Field mustard	plastid	74.84	74.96
PGSC0003DMT400073716	Potato	cytosol	13.56	72.81

Protein Annotations

KEGG:00290+4.2.1.9	KEGG:00770+4.2.1.9	EntrezGene:100273676	Gene3D:3.50.30.80	MapMan:4.1.2.2.8.5	MapMan:4.1.3.2.3
UniProt:A0A1D6KMC8	InterPro:DiOHA_6PGluconate_deHydtase	InterPro:DiOHA_6PGluconate_deHydtase_CS	InterPro:DihydroxyA_deHydtase	GO:GO:0003674	GO:GO:0003824
GO:GO:0004160	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009082	GO:GO:0009987
InterPro:IlvD/EDD_N	HAMAP:MF_00012	ProteinID:ONM03992.1	ProteinID:ONM03997.1	PFAM:PF00920	ScanProsite:PS00886
ScanProsite:PS00887	PANTHER:PTHR21000	PANTHER:PTHR21000:SF17	SUPFAM:SSF143975	SUPFAM:SSF52016	TIGRFAMs:TIGR00110
UniParc:UPI00084332DA	EnsemblPlantsGene:Zm00001d031929	EnsemblPlants:Zm00001d031929_P005	EnsemblPlants:Zm00001d031929_T005	SEG:seg	:

Description

Dihydroxy-acid dehydratase chloroplastic

Coordinates

chr1:-:207099959..207105197

Molecular Weight (calculated)

65802.0 Da

IEP (calculated)

7.439

GRAVY (calculated)

-0.062

Length

612 amino acids

Sequence
(BLAST)

001: MQSMALTSPS LPEVGPVSGR RLQRIRATAV SDELKLNKYS ARITEPKSQG ASQAVLYGVG LTDADLRKPQ VGVSSVWYEG NTCNMHLLRL AEAVRDGVRE
101: AGMVGFRFNT VGVSDAISMG TRGMCYSLQS RDLIADSIET VMGAQHYDAN ISIPGCDKNM PGTIMAMGRL NRPSIMIYGG TIKPGHFQGN SYDIVSAFQC
201: YGEYVSGSIT DEQRKNVLRN SCPGAGACGG MYTANTMASA IETLGMSLPY SSSTPAEDPL KLEECRLAGK YLLELLKMDL KPKDIITEKS LRNAMVIVMA
301: LGGSTNAVLH LIAIARSVGL HLTLDDFQKV SDQVPFLADL KPSGKYVMED LHKIGGTPAV IHYLLEQGLL DGDCMTVTGK TLAENAKIFP PLSEGQQIIR
401: PLDNPIKPTG HIQILYGNLA PEGSVAKITG KEGLFFSGPA LVFEGEESMI TAISENPANF KGKVVVIRGE GPKGGPGMPE MLTPTSAIMG AGLGKECALL
501: TDGRFSGGSH GFVVGHICPE AQYMIVKINC RRFVLFTKGA IFQEGGPIGL VHSGDVITID VSKRVIDVDL TEQQLEERRR KWTPPPYKST CGALWKYIKL
601: VAPASRGCVT DE

Best Arabidopsis Sequence Match ( AT3G23940.1 )
(BLAST)

001: MQATIFSPRA TLFPCKPLLP SHNVNSRRPS IISCSAQSVT ADPSPPITDT NKLNKYSSRI TEPKSQGGSQ AILHGVGLSD DDLLKPQIGI SSVWYEGNTC
101: NMHLLKLSEA VKEGVENAGM VGFRFNTIGV SDAISMGTRG MCFSLQSRDL IADSIETVMS AQWYDGNISI PGCDKNMPGT IMAMGRLNRP GIMVYGGTIK
201: PGHFQDKTYD IVSAFQSYGE FVSGSISDEQ RKTVLHHSCP GAGACGGMYT ANTMASAIEA MGMSLPYSSS IPAEDPLKLD ECRLAGKYLL ELLKMDLKPR
301: DIITPKSLRN AMVSVMALGG STNAVLHLIA IARSVGLELT LDDFQKVSDA VPFLADLKPS GKYVMEDIHK IGGTPAVLRY LLELGLMDGD CMTVTGQTLA
401: QNLENVPSLT EGQEIIRPLS NPIKETGHIQ ILRGDLAPDG SVAKITGKEG LYFSGPALVF EGEESMLAAI SADPMSFKGT VVVIRGEGPK GGPGMPEMLT
501: PTSAIMGAGL GKECALLTDG RFSGGSHGFV VGHICPEAQE GGPIGLIKNG DIITIDIGKK RIDTQVSPEE MNDRRKKWTA PAYKVNRGVL YKYIKNVQSA
601: SDGCVTDE

Arabidopsis Description

DHADDihydroxy-acid dehydratase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.