Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G067040.5 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G14180.1 | HORVU2Hr1G067040.5 | AT4G14180.1 | 17762870 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G292500.2 | Wheat | plasma membrane | 93.04 | 89.72 |
| TraesCS2A01G275100.2 | Wheat | plastid | 93.81 | 85.04 |
| Os04t0347700-01 | Rice | extracellular, plasma membrane | 14.45 | 80.38 |
| TraesCS2D01G274100.1 | Wheat | mitochondrion | 94.07 | 80.32 |
| Os04t0347800-01 | Rice | endoplasmic reticulum, vacuole | 26.14 | 71.36 |
| OQU76853 | Sorghum | plasma membrane | 63.8 | 70.27 |
| Zm00001d046970_P002 | Maize | plastid | 71.54 | 64.1 |
| GSMUA_Achr5P00720_001 | Banana | nucleus | 47.98 | 42.5 |
| PGSC0003DMT400063222 | Potato | endoplasmic reticulum, extracellular, vacuole | 11.61 | 37.92 |
| VIT_05s0062g00140.t01 | Wine grape | cytosol | 40.33 | 37.37 |
| KRH31552 | Soybean | cytosol | 39.21 | 35.29 |
| Bra000733.1-P | Field mustard | plasma membrane | 35.17 | 33.94 |
| AT4G14180.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 37.49 | 32.78 |
| Solyc03g114040.2.1 | Tomato | cytosol, nucleus, plasma membrane, plastid | 37.49 | 32.51 |
| CDY05132 | Canola | cytosol, nucleus, plasma membrane | 37.15 | 32.36 |
| CDX90779 | Canola | cytosol | 36.72 | 32.01 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G067040.5 | EnsemblPlantsGene:HORVU2Hr1G067040 | PANTHER:PTHR36379 | SEG:seg | UniParc:UPI000B483C10 | UniProt:A0A287IA14 |
| MapMan:13.3.6.2.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:469042313..469066007
Molecular Weight (calculated)
129284.0 Da
IEP (calculated)
4.728
GRAVY (calculated)
0.315
Length
1163 amino acids
Sequence
(BLAST)
(BLAST)
0001: DLVARLAHVL SLGSLVKHFH TLHCLGFLLN SIKGAASYIG DALPLFLNLV NNLRLPSDEI RGEIMFMLYK LSLLNATPWD NICDNDNVDL SAVGKSLLQL
0101: SLEVLLKTQN DAVRLNCIAL LLTLAKKEAF DILLLGDLSL IKSVEEEEST QTDDTPLNAS IIVLFADAVK GSLLSTNLEV QTGTLDLIFH FLSSDANMCV
0201: VLQTLIDENV ADYVFEVLRL SGNNEPLVIS SIQVLSLLAT SEEMFKEKLA IGFSTLLPVL HHVTEIPFHP VQSQVLRLVW ICIVNCSGIL SLSQEEQIAC
0301: TLTLILRRND NGELGMCSET FALVCSILIE IMRSPSAHDI QKLPSLIEEA SKHAISSTLP PAYDCASLVP HSLRLLKEAL IFCLEGNANK EVKKDLEDSI
0401: IEICGTYLLH WLDSSVVDGN DDETLGEILQ IFHIILSSTS HNKQLKFAEM LASSSWFSLS FGFMGLFPTD HVKSLVYLVT SSIVDKILGC KYGETIRDAY
0501: VYLPSDPTEF AYLLGQCSSE DFNLASCQCS ILVILYACSF YNERLVADSQ LLSSVEQYIL LNGGKFPYEI AGSVMLTLLV HLYAFVRGIS FGCTIQHSPE
0601: AEKTLFHVMA SKEWDLLFIR VHPIALKWLF QKVELLEPLS FQMLNFCRTF CEDKTVVLSN SSQLVDIKMV AELVFSGETR LSSLLVSLLN QIINHGTEDE
0701: VFSVVNVIAE ILVISPCSSS HFTSSGVIDA VGSIYCSPYS SRIKTVCSLL IFNILYSASA MTVYWLDEWL ALTMKLLEYF NSSLDYTSSD QEQKILIGIF
0801: CLILHHSASK VLIEPAKAII LNKPLVSLTD GIIQEACAKG PSLLQYNQET DFGGFMILIL QLVFFSLRSL HAILDPSIDW QEFLQHSDNT QFFSVVGIPC
0901: HDLCRLMHFG PYPIKLIASQ CLLELLTRVS DQRSYLNAEL RCSAQYMKSI IAVIEGLVLS QDSRVAENCG SCLSMILGWE KFGSQENMVG RESKWSRLIT
1001: EELAVALTAP GLTSKSFSNQ QKIASNIAVS LLKLSQVPEW LTSLFDSSLI SGVVGNLSAR NVTADIVKLF SELMAKKYLT QEHIISLHNL FQVCRRQVYE
1101: GSSLKSELSE QKAEETVARS PDEVCALLFG IMLNQRTACT LQMEQQNLLR EIDLFFQESS QGE
0101: SLEVLLKTQN DAVRLNCIAL LLTLAKKEAF DILLLGDLSL IKSVEEEEST QTDDTPLNAS IIVLFADAVK GSLLSTNLEV QTGTLDLIFH FLSSDANMCV
0201: VLQTLIDENV ADYVFEVLRL SGNNEPLVIS SIQVLSLLAT SEEMFKEKLA IGFSTLLPVL HHVTEIPFHP VQSQVLRLVW ICIVNCSGIL SLSQEEQIAC
0301: TLTLILRRND NGELGMCSET FALVCSILIE IMRSPSAHDI QKLPSLIEEA SKHAISSTLP PAYDCASLVP HSLRLLKEAL IFCLEGNANK EVKKDLEDSI
0401: IEICGTYLLH WLDSSVVDGN DDETLGEILQ IFHIILSSTS HNKQLKFAEM LASSSWFSLS FGFMGLFPTD HVKSLVYLVT SSIVDKILGC KYGETIRDAY
0501: VYLPSDPTEF AYLLGQCSSE DFNLASCQCS ILVILYACSF YNERLVADSQ LLSSVEQYIL LNGGKFPYEI AGSVMLTLLV HLYAFVRGIS FGCTIQHSPE
0601: AEKTLFHVMA SKEWDLLFIR VHPIALKWLF QKVELLEPLS FQMLNFCRTF CEDKTVVLSN SSQLVDIKMV AELVFSGETR LSSLLVSLLN QIINHGTEDE
0701: VFSVVNVIAE ILVISPCSSS HFTSSGVIDA VGSIYCSPYS SRIKTVCSLL IFNILYSASA MTVYWLDEWL ALTMKLLEYF NSSLDYTSSD QEQKILIGIF
0801: CLILHHSASK VLIEPAKAII LNKPLVSLTD GIIQEACAKG PSLLQYNQET DFGGFMILIL QLVFFSLRSL HAILDPSIDW QEFLQHSDNT QFFSVVGIPC
0901: HDLCRLMHFG PYPIKLIASQ CLLELLTRVS DQRSYLNAEL RCSAQYMKSI IAVIEGLVLS QDSRVAENCG SCLSMILGWE KFGSQENMVG RESKWSRLIT
1001: EELAVALTAP GLTSKSFSNQ QKIASNIAVS LLKLSQVPEW LTSLFDSSLI SGVVGNLSAR NVTADIVKLF SELMAKKYLT QEHIISLHNL FQVCRRQVYE
1101: GSSLKSELSE QKAEETVARS PDEVCALLFG IMLNQRTACT LQMEQQNLLR EIDLFFQESS QGE
0001: MFFQHSQLQN SDHLLHESMA DSNHQSLSPP CANGHRSTIS LRDDQGGTFC LICFSNLVSD PRIPTVHVSY ALHQLSIAIS EPIFLRTLLS SHIHFLVSPL
0101: VHALSSIDDA PIAIQIMDMI SLLCSVEESS IGEDFVERIS DQLSSGALGW SRRQLHMLHC FGVLMSCENI NINSHIRDKE ALVCQLVEGL QLPSEEIRGE
0201: ILFALYKFSA LQFTEQNVDG IEVLSLLCPK LLCLSLEALA KTQRDDVRLN CVALLTILAQ QGLLANSHSN SASSMSLDEV DDDPMQTAEN VAARPCLNVL
0301: FAEAIKGPLL STDSEVQIKT LDLIFHYISQ ESTPSKQIQV MVEENVADYI FEILRLSECK DQVVNSCLRV LDLFSLAEHS FRKRLVIGFP SVIRVLHYVG
0401: EVPCHPFQIQ TLKLISSCIS DFPGIASSSQ VQEIALVLKK MLERYYSQEM GLFPDAFAII CSVFVSLMKT PSFGETADVL TSLQESLRHS ILASLSLPEK
0501: DSTQILHAVY LLNEVYVYCT ASTSINKTIC IELRHCVIDV CTSHLLPWFL SDVNEVNEEA TLGIMETFHS ILLQNSDIQA KEFAELLVSA DWFSFSFGCL
0601: GNFCTDNMKQ RIYLMLSSLV DILLEQKTGS HIRDALHCLP SDPQDLLFLL GQASSNNQEL ASCQSAALLI FHTSSIYNDR LADDKLVLAS LEQYIILNKT
0701: SLICAISDSP ALLNLVNLYG LCRSLQNERY QISYSLEAER IIFHLLNEYE WDLGSINIHL ESLKWLFQQE SISKSLIYQI QKISRNNLIG NEVHNVYGDG
0801: RQRSLTYWFA KLISEGDNYA ATLLVNLLTQ LAEKEEQEND VISILNLMNT IVSIFPTASN NLSMNGIGSV IHRLVSGFSN SSLGTSFRTL LLLVFNILTS
0901: VQPAVLMIDE SWYAVSIKLL NFLSLRDTAI KQNHEDMVVI GILSLVLYHS SDGALVEASR NIVSNSYLVS AINTVVDVAC SKGPALTQCQ DETNIGEALA
1001: FTLLLYFFSL RSLQIVLAGA VDWQTFFGTS TSLETLPVVC IHCHNLCRLM HFGAPQIKLI ASYCLLELLT GLSEQVDIKK EQLQCSSSYL KSMKAVLGGL
1101: VFCDDIRVAT NSALCLSMIL GWEDMEGRTE MLKTSSWYRF IAEEMSVSLA MPCSASSTYV NHHKPAVYLT VAMLRLKNKP VWLRTVFDES CISSMIQNLN
1201: GINISREIVI LFRELMQAEL LNSQQVTKLD RAFQECRKQM HRNGTRDETV EEQVQRKIPS IHDHSEFCNY LVHLMVSNSF GHPSESETYT QKKKQILDEM
1301: EQFSELISTR EGRVSPIQEE TRQMQTERIV
0101: VHALSSIDDA PIAIQIMDMI SLLCSVEESS IGEDFVERIS DQLSSGALGW SRRQLHMLHC FGVLMSCENI NINSHIRDKE ALVCQLVEGL QLPSEEIRGE
0201: ILFALYKFSA LQFTEQNVDG IEVLSLLCPK LLCLSLEALA KTQRDDVRLN CVALLTILAQ QGLLANSHSN SASSMSLDEV DDDPMQTAEN VAARPCLNVL
0301: FAEAIKGPLL STDSEVQIKT LDLIFHYISQ ESTPSKQIQV MVEENVADYI FEILRLSECK DQVVNSCLRV LDLFSLAEHS FRKRLVIGFP SVIRVLHYVG
0401: EVPCHPFQIQ TLKLISSCIS DFPGIASSSQ VQEIALVLKK MLERYYSQEM GLFPDAFAII CSVFVSLMKT PSFGETADVL TSLQESLRHS ILASLSLPEK
0501: DSTQILHAVY LLNEVYVYCT ASTSINKTIC IELRHCVIDV CTSHLLPWFL SDVNEVNEEA TLGIMETFHS ILLQNSDIQA KEFAELLVSA DWFSFSFGCL
0601: GNFCTDNMKQ RIYLMLSSLV DILLEQKTGS HIRDALHCLP SDPQDLLFLL GQASSNNQEL ASCQSAALLI FHTSSIYNDR LADDKLVLAS LEQYIILNKT
0701: SLICAISDSP ALLNLVNLYG LCRSLQNERY QISYSLEAER IIFHLLNEYE WDLGSINIHL ESLKWLFQQE SISKSLIYQI QKISRNNLIG NEVHNVYGDG
0801: RQRSLTYWFA KLISEGDNYA ATLLVNLLTQ LAEKEEQEND VISILNLMNT IVSIFPTASN NLSMNGIGSV IHRLVSGFSN SSLGTSFRTL LLLVFNILTS
0901: VQPAVLMIDE SWYAVSIKLL NFLSLRDTAI KQNHEDMVVI GILSLVLYHS SDGALVEASR NIVSNSYLVS AINTVVDVAC SKGPALTQCQ DETNIGEALA
1001: FTLLLYFFSL RSLQIVLAGA VDWQTFFGTS TSLETLPVVC IHCHNLCRLM HFGAPQIKLI ASYCLLELLT GLSEQVDIKK EQLQCSSSYL KSMKAVLGGL
1101: VFCDDIRVAT NSALCLSMIL GWEDMEGRTE MLKTSSWYRF IAEEMSVSLA MPCSASSTYV NHHKPAVYLT VAMLRLKNKP VWLRTVFDES CISSMIQNLN
1201: GINISREIVI LFRELMQAEL LNSQQVTKLD RAFQECRKQM HRNGTRDETV EEQVQRKIPS IHDHSEFCNY LVHLMVSNSF GHPSESETYT QKKKQILDEM
1301: EQFSELISTR EGRVSPIQEE TRQMQTERIV
Arabidopsis Description
PRD1Protein PRD1 [Source:UniProtKB/Swiss-Prot;Acc:O23277]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.