Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
- nucleus 1
- plasma membrane 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G275100.2 | Wheat | plastid | 92.88 | 98.6 |
| HORVU2Hr1G067040.5 | Barley | extracellular, plasma membrane | 80.32 | 94.07 |
| TraesCS2B01G292600.1 | Wheat | plastid | 10.06 | 91.33 |
| Os04t0347700-01 | Rice | extracellular, plasma membrane | 12.33 | 80.38 |
| Zm00001d046970_P002 | Maize | plastid | 68.36 | 71.73 |
| Os04t0347800-01 | Rice | endoplasmic reticulum, vacuole | 22.39 | 71.6 |
| OQU76853 | Sorghum | plasma membrane | 54.85 | 70.74 |
| GSMUA_Achr5P00720_001 | Banana | nucleus | 44.2 | 45.85 |
| VIT_05s0062g00140.t01 | Wine grape | cytosol | 38.11 | 41.35 |
| KRH31552 | Soybean | cytosol | 37.0 | 39.01 |
| PGSC0003DMT400063222 | Potato | endoplasmic reticulum, extracellular, vacuole | 9.69 | 37.08 |
| AT4G14180.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 35.39 | 36.24 |
| Solyc03g114040.2.1 | Tomato | cytosol, nucleus, plasma membrane, plastid | 35.32 | 35.87 |
| CDY05132 | Canola | cytosol, nucleus, plasma membrane | 35.02 | 35.73 |
| CDX90779 | Canola | cytosol | 34.8 | 35.53 |
| Bra000733.1-P | Field mustard | plasma membrane | 30.47 | 34.44 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G274100.1 | EnsemblPlantsGene:TraesCS2D01G274100 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-type_fold | PANTHER:PTHR36379 |
| SEG:seg | SUPFAM:SSF48371 | MapMan:13.3.6.2.2 | : | : | : |
Description
No Description!
Coordinates
chr2D:+:342096400..342105974
Molecular Weight (calculated)
150034.0 Da
IEP (calculated)
5.608
GRAVY (calculated)
0.303
Length
1362 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTYSKIRRAA NRLLHALRSL VTKRWIAEHS QIMRRLFKVN KNYYAVFGIP LLLRCLKKSV HFKAASRSPA KPPQSPSLHM ESDGEHSPPH ACGAGHRASH
0101: SLPTSAGGSV CVSCAAALLS SASAPSHHVS HVLASLSLAL ADPAFLAPLR AAHPRLLAVP LVEALAGAAA RRDAALATQA SDLAADLASA VGPPAASELV
0201: ARLAHVLSSG SLVKHFHMLH CLGFLLNSIK GASAYIGDAV SLFLNLVNNL RLPSDEIRGE ILFMLYKLSL LNATPWDNIC DNDNVDLSAV GKSLLQLSLE
0301: VLLKTQNDAV RLNCIALLLA LAKKEAFDIL LLGDLSLIKS AEEEESTQTD DVPPNASIIV LFADAVKGSL LSTNLEVQTG TLDLIFHFLS SDANICVVLQ
0401: TLVDENVADY VFEVLRLSGN NDPLVISSIQ VLSLLATSEE MFKEKLVIGF STLLPVLHYV TEIPFHPVQS QVLRLVWICI ANCSGILSLS QEEQIACTLT
0501: LILRRNDSGE LGMCSETFAL VCSILIEIMR SPSAHDIQKL PSLIEEASKH AISSTLPHAY DSAFLVPHSL RLLKEALIFC LEGNTDKISV KKDLEDSVIE
0601: ICGTYLLHWL ETAVVDGNDD ETLGEILQIF HIILSSTCHN KQLKFAEMLA SSSWFSLSFG FMGLFPTDHV KSVVYLITSS IVDKILGCKY GETIRDAYVY
0701: LPSDPTELVY LLGQCSSEDF NLASCQCAIL VILYACSFYN ERLVADSQLL SSVEQYILLN GGKFPYEIAG SVMLTLLVHL YAFVRGISFG CTIQHSPEAE
0801: RTLFHVMACK EWDLLFIRVH PIALKWLFQK VELLEPLSFQ MLNFCRTFCE DRTVVLLNSS QLVDIKMVAE LVFSGETSLS SLLVSLLNQI IKDGTEDEVF
0901: SVVNVIAEIL VISPCSSSHF TSSGVIDAVG SIYCSPYSSR IKTVCSLLIF NILYSASAMT VYWEDEWLAL TMKLLEYFNS SLDYTSSDQE QKILIGIFCL
1001: ILHHSASKVL IEPAKAIILN KPLVSLTDGI IQEACAKGPS LLQYNQETDF GGFMILILQL VFFSLRSLHA ILDPSIDWQE FLQHSDNTQF FSVVGIPCHD
1101: LCRLMHFGPY PVKLIASQCL LELLTRISDQ RSYLNAELRC SAQYMKSIIA VIEGLVLSQD SRVAENCGSC LSMILGWEKF GSQENMVGRE SKWSRLIMEE
1201: FAVALTAPGL TSKSFSNQQK IASNIAVSLL KLSQVPEWLT SLFDSSLISG VVGNLSARNV TADIVKLFSE LMTKKYLTQE HVVSLHNLFQ VCRRQVYEGS
1301: CSKSELSEQK AEETVARSPD EVCALLFGIV LNQRTASCTL QMEQQNLLRE IDLFFQESSQ GE
0101: SLPTSAGGSV CVSCAAALLS SASAPSHHVS HVLASLSLAL ADPAFLAPLR AAHPRLLAVP LVEALAGAAA RRDAALATQA SDLAADLASA VGPPAASELV
0201: ARLAHVLSSG SLVKHFHMLH CLGFLLNSIK GASAYIGDAV SLFLNLVNNL RLPSDEIRGE ILFMLYKLSL LNATPWDNIC DNDNVDLSAV GKSLLQLSLE
0301: VLLKTQNDAV RLNCIALLLA LAKKEAFDIL LLGDLSLIKS AEEEESTQTD DVPPNASIIV LFADAVKGSL LSTNLEVQTG TLDLIFHFLS SDANICVVLQ
0401: TLVDENVADY VFEVLRLSGN NDPLVISSIQ VLSLLATSEE MFKEKLVIGF STLLPVLHYV TEIPFHPVQS QVLRLVWICI ANCSGILSLS QEEQIACTLT
0501: LILRRNDSGE LGMCSETFAL VCSILIEIMR SPSAHDIQKL PSLIEEASKH AISSTLPHAY DSAFLVPHSL RLLKEALIFC LEGNTDKISV KKDLEDSVIE
0601: ICGTYLLHWL ETAVVDGNDD ETLGEILQIF HIILSSTCHN KQLKFAEMLA SSSWFSLSFG FMGLFPTDHV KSVVYLITSS IVDKILGCKY GETIRDAYVY
0701: LPSDPTELVY LLGQCSSEDF NLASCQCAIL VILYACSFYN ERLVADSQLL SSVEQYILLN GGKFPYEIAG SVMLTLLVHL YAFVRGISFG CTIQHSPEAE
0801: RTLFHVMACK EWDLLFIRVH PIALKWLFQK VELLEPLSFQ MLNFCRTFCE DRTVVLLNSS QLVDIKMVAE LVFSGETSLS SLLVSLLNQI IKDGTEDEVF
0901: SVVNVIAEIL VISPCSSSHF TSSGVIDAVG SIYCSPYSSR IKTVCSLLIF NILYSASAMT VYWEDEWLAL TMKLLEYFNS SLDYTSSDQE QKILIGIFCL
1001: ILHHSASKVL IEPAKAIILN KPLVSLTDGI IQEACAKGPS LLQYNQETDF GGFMILILQL VFFSLRSLHA ILDPSIDWQE FLQHSDNTQF FSVVGIPCHD
1101: LCRLMHFGPY PVKLIASQCL LELLTRISDQ RSYLNAELRC SAQYMKSIIA VIEGLVLSQD SRVAENCGSC LSMILGWEKF GSQENMVGRE SKWSRLIMEE
1201: FAVALTAPGL TSKSFSNQQK IASNIAVSLL KLSQVPEWLT SLFDSSLISG VVGNLSARNV TADIVKLFSE LMTKKYLTQE HVVSLHNLFQ VCRRQVYEGS
1301: CSKSELSEQK AEETVARSPD EVCALLFGIV LNQRTASCTL QMEQQNLLRE IDLFFQESSQ GE
0001: MFFQHSQLQN SDHLLHESMA DSNHQSLSPP CANGHRSTIS LRDDQGGTFC LICFSNLVSD PRIPTVHVSY ALHQLSIAIS EPIFLRTLLS SHIHFLVSPL
0101: VHALSSIDDA PIAIQIMDMI SLLCSVEESS IGEDFVERIS DQLSSGALGW SRRQLHMLHC FGVLMSCENI NINSHIRDKE ALVCQLVEGL QLPSEEIRGE
0201: ILFALYKFSA LQFTEQNVDG IEVLSLLCPK LLCLSLEALA KTQRDDVRLN CVALLTILAQ QGLLANSHSN SASSMSLDEV DDDPMQTAEN VAARPCLNVL
0301: FAEAIKGPLL STDSEVQIKT LDLIFHYISQ ESTPSKQIQV MVEENVADYI FEILRLSECK DQVVNSCLRV LDLFSLAEHS FRKRLVIGFP SVIRVLHYVG
0401: EVPCHPFQIQ TLKLISSCIS DFPGIASSSQ VQEIALVLKK MLERYYSQEM GLFPDAFAII CSVFVSLMKT PSFGETADVL TSLQESLRHS ILASLSLPEK
0501: DSTQILHAVY LLNEVYVYCT ASTSINKTIC IELRHCVIDV CTSHLLPWFL SDVNEVNEEA TLGIMETFHS ILLQNSDIQA KEFAELLVSA DWFSFSFGCL
0601: GNFCTDNMKQ RIYLMLSSLV DILLEQKTGS HIRDALHCLP SDPQDLLFLL GQASSNNQEL ASCQSAALLI FHTSSIYNDR LADDKLVLAS LEQYIILNKT
0701: SLICAISDSP ALLNLVNLYG LCRSLQNERY QISYSLEAER IIFHLLNEYE WDLGSINIHL ESLKWLFQQE SISKSLIYQI QKISRNNLIG NEVHNVYGDG
0801: RQRSLTYWFA KLISEGDNYA ATLLVNLLTQ LAEKEEQEND VISILNLMNT IVSIFPTASN NLSMNGIGSV IHRLVSGFSN SSLGTSFRTL LLLVFNILTS
0901: VQPAVLMIDE SWYAVSIKLL NFLSLRDTAI KQNHEDMVVI GILSLVLYHS SDGALVEASR NIVSNSYLVS AINTVVDVAC SKGPALTQCQ DETNIGEALA
1001: FTLLLYFFSL RSLQIVLAGA VDWQTFFGTS TSLETLPVVC IHCHNLCRLM HFGAPQIKLI ASYCLLELLT GLSEQVDIKK EQLQCSSSYL KSMKAVLGGL
1101: VFCDDIRVAT NSALCLSMIL GWEDMEGRTE MLKTSSWYRF IAEEMSVSLA MPCSASSTYV NHHKPAVYLT VAMLRLKNKP VWLRTVFDES CISSMIQNLN
1201: GINISREIVI LFRELMQAEL LNSQQVTKLD RAFQECRKQM HRNGTRDETV EEQVQRKIPS IHDHSEFCNY LVHLMVSNSF GHPSESETYT QKKKQILDEM
1301: EQFSELISTR EGRVSPIQEE TRQMQTERIV
0101: VHALSSIDDA PIAIQIMDMI SLLCSVEESS IGEDFVERIS DQLSSGALGW SRRQLHMLHC FGVLMSCENI NINSHIRDKE ALVCQLVEGL QLPSEEIRGE
0201: ILFALYKFSA LQFTEQNVDG IEVLSLLCPK LLCLSLEALA KTQRDDVRLN CVALLTILAQ QGLLANSHSN SASSMSLDEV DDDPMQTAEN VAARPCLNVL
0301: FAEAIKGPLL STDSEVQIKT LDLIFHYISQ ESTPSKQIQV MVEENVADYI FEILRLSECK DQVVNSCLRV LDLFSLAEHS FRKRLVIGFP SVIRVLHYVG
0401: EVPCHPFQIQ TLKLISSCIS DFPGIASSSQ VQEIALVLKK MLERYYSQEM GLFPDAFAII CSVFVSLMKT PSFGETADVL TSLQESLRHS ILASLSLPEK
0501: DSTQILHAVY LLNEVYVYCT ASTSINKTIC IELRHCVIDV CTSHLLPWFL SDVNEVNEEA TLGIMETFHS ILLQNSDIQA KEFAELLVSA DWFSFSFGCL
0601: GNFCTDNMKQ RIYLMLSSLV DILLEQKTGS HIRDALHCLP SDPQDLLFLL GQASSNNQEL ASCQSAALLI FHTSSIYNDR LADDKLVLAS LEQYIILNKT
0701: SLICAISDSP ALLNLVNLYG LCRSLQNERY QISYSLEAER IIFHLLNEYE WDLGSINIHL ESLKWLFQQE SISKSLIYQI QKISRNNLIG NEVHNVYGDG
0801: RQRSLTYWFA KLISEGDNYA ATLLVNLLTQ LAEKEEQEND VISILNLMNT IVSIFPTASN NLSMNGIGSV IHRLVSGFSN SSLGTSFRTL LLLVFNILTS
0901: VQPAVLMIDE SWYAVSIKLL NFLSLRDTAI KQNHEDMVVI GILSLVLYHS SDGALVEASR NIVSNSYLVS AINTVVDVAC SKGPALTQCQ DETNIGEALA
1001: FTLLLYFFSL RSLQIVLAGA VDWQTFFGTS TSLETLPVVC IHCHNLCRLM HFGAPQIKLI ASYCLLELLT GLSEQVDIKK EQLQCSSSYL KSMKAVLGGL
1101: VFCDDIRVAT NSALCLSMIL GWEDMEGRTE MLKTSSWYRF IAEEMSVSLA MPCSASSTYV NHHKPAVYLT VAMLRLKNKP VWLRTVFDES CISSMIQNLN
1201: GINISREIVI LFRELMQAEL LNSQQVTKLD RAFQECRKQM HRNGTRDETV EEQVQRKIPS IHDHSEFCNY LVHLMVSNSF GHPSESETYT QKKKQILDEM
1301: EQFSELISTR EGRVSPIQEE TRQMQTERIV
Arabidopsis Description
PRD1Protein PRD1 [Source:UniProtKB/Swiss-Prot;Acc:O23277]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.