Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G14180.1 | KRH73898 | AT3G13170.1 | 17762870 |
| AT4G14180.1 | KRH31552 | AT4G14180.1 | 17762870 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0062g00140.t01 | Wine grape | cytosol | 54.49 | 56.1 |
| AT4G14180.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 47.37 | 46.02 |
| PGSC0003DMT400063222 | Potato | endoplasmic reticulum, extracellular, vacuole | 12.38 | 44.94 |
| CDY05132 | Canola | cytosol, nucleus, plasma membrane | 46.13 | 44.64 |
| CDX90779 | Canola | cytosol | 45.9 | 44.45 |
| Solyc03g114040.2.1 | Tomato | cytosol, nucleus, plasma membrane, plastid | 45.82 | 44.15 |
| Bra000733.1-P | Field mustard | plasma membrane | 40.25 | 43.15 |
| Os04t0347700-01 | Rice | extracellular, plasma membrane | 6.97 | 43.06 |
| GSMUA_Achr5P00720_001 | Banana | nucleus | 43.19 | 42.5 |
| Os04t0347800-01 | Rice | endoplasmic reticulum, vacuole | 13.31 | 40.38 |
| OQU76853 | Sorghum | plasma membrane | 32.2 | 39.39 |
| HORVU2Hr1G067040.5 | Barley | extracellular, plasma membrane | 35.29 | 39.21 |
| TraesCS2A01G275100.2 | Wheat | plastid | 38.85 | 39.13 |
| Zm00001d046970_P002 | Maize | plastid | 38.24 | 38.06 |
| TraesCS2B01G292500.2 | Wheat | plasma membrane | 35.37 | 37.89 |
| TraesCS2D01G274100.1 | Wheat | mitochondrion | 39.01 | 37.0 |
| TraesCS2B01G292600.1 | Wheat | plastid | 3.79 | 32.67 |
Protein Annotations
| EMBL:ACUP02007146 | EnsemblPlants:KRH31552 | EnsemblPlantsGene:GLYMA_11G253600 | EntrezGene:100784718 | GO:GO:0003674 | GO:GO:0005488 |
| InterPro:ARM-type_fold | PANTHER:PTHR36379 | ProteinID:KRH31552 | ProteinID:KRH31552.1 | SEG:seg | SUPFAM:SSF48371 |
| UniParc:UPI000233D26F | UniProt:I1LN40 | MapMan:13.3.6.2.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:34428083..34434022
Molecular Weight (calculated)
144105.0 Da
IEP (calculated)
4.820
GRAVY (calculated)
0.218
Length
1292 amino acids
Sequence
(BLAST)
(BLAST)
0001: MYWRGDSQSE DDGGFSISCS QGHRSSLNLQ THDEGGSLCL VCFSNLVSNP LSPTVHVSYA LSQLSRSLSI PHFLQSLLTF HPHFLLSPLL AALSSFHDQP
0101: IAAQLTHLIL SLSSSADPSL CSQFIARISD RIASAALGWT SPQLHMIHCL GALLNCEKDD DLHAHIKDMY SFISVLVTGL QLPSEEIRGE VLFVLYKLYV
0201: LQSTSAGGDG SDMLIPFCPQ ILYLLVDVLM KTQNDDVRLN CIALLTMLAR RHLLREECAY DTSNMSSNGG VNSKETEDGT KGTSLVNLFA EAIKGPLLSS
0301: DSQVQIGTLD LLFHYLSSVR NSDYQIRVLV EENIADYLFE ILRLSEYKDP AVKMCLQVLG LLSTAEETFK LRLVVGISTL IPALRYVAEV PFHPVQCETL
0401: KLIYECISEC PGSVSTSQLE ELILVLIRML RKHSDGEMGM IPETFIMVCS IFVALIRSPS CNGALDLSKS IEEATNHAIL ACLSVSERNI NQILQCLYLL
0501: KEAYAYSHDG NSINSSKLEL RSGILDICRT HLLPWLVVGI NEMEEDIALG LLETFHSILL LHSSINSMEF AETLISIGWF SFSFECLGLF TGDRMKNRIY
0601: LLLSSLMDSL LGNDSGQPIR EAALHLPRDP IDLLFLLGQR STNSLDLPSC QSAVLLIMYT SSLYDERLAD EKLILASLEQ YILLNRGNFH NRTTDNLTVT
0701: RLVNLYSSLR GLGSMNYQIH YSRDAEEIIF QLINNDEWDL LSARIHTVSL KWLFQQENII NSLSHQILKF CRSYNLEEAD IIIGNNYQTV NVQTLSELVS
0801: TEDNYGARLF VCLLAQLLEE EGREYDIICV LNVMATMVLV CPAACEQLSL HGIATTIRTW CYLSNSLSTT TYMSILILVF NTLSSVHPET LSVDQSWVAI
0901: TMKMMECSIP SKEVDILSDE SLFVIGILSL ILHLSTNKAL EETSKAILFN TCIISMVNTV VCAASSKGPA LVDHDEGTST GETLIFVLLL HYFAVKSLHA
1001: ILPGFVDWQS FFASTNPSEP LAFIGIRCHD LCRLLHFGST VIKIAASYSL LELFKRISDQ INSNHEELRC TIGYIMSIRS ILEGLVFYND LRVATNCSLC
1101: LSMILGWEKL TKETKVLEES SWCRLIIEEM TVSLAAPALA SQSFMNNQRP AVLVAIALLK LHKIPQWMRS VFDNSSISGI LGNLSASNLS SEILALFREL
1201: LKSNFLSTEQ IATINQMLQE CRKRMYSNNA QEDLPNEPIK KVLTTSYNMG DICEYLIDLM TSEAYLDTGS KKLLEEIELF FSTLSVDNGS CM
0101: IAAQLTHLIL SLSSSADPSL CSQFIARISD RIASAALGWT SPQLHMIHCL GALLNCEKDD DLHAHIKDMY SFISVLVTGL QLPSEEIRGE VLFVLYKLYV
0201: LQSTSAGGDG SDMLIPFCPQ ILYLLVDVLM KTQNDDVRLN CIALLTMLAR RHLLREECAY DTSNMSSNGG VNSKETEDGT KGTSLVNLFA EAIKGPLLSS
0301: DSQVQIGTLD LLFHYLSSVR NSDYQIRVLV EENIADYLFE ILRLSEYKDP AVKMCLQVLG LLSTAEETFK LRLVVGISTL IPALRYVAEV PFHPVQCETL
0401: KLIYECISEC PGSVSTSQLE ELILVLIRML RKHSDGEMGM IPETFIMVCS IFVALIRSPS CNGALDLSKS IEEATNHAIL ACLSVSERNI NQILQCLYLL
0501: KEAYAYSHDG NSINSSKLEL RSGILDICRT HLLPWLVVGI NEMEEDIALG LLETFHSILL LHSSINSMEF AETLISIGWF SFSFECLGLF TGDRMKNRIY
0601: LLLSSLMDSL LGNDSGQPIR EAALHLPRDP IDLLFLLGQR STNSLDLPSC QSAVLLIMYT SSLYDERLAD EKLILASLEQ YILLNRGNFH NRTTDNLTVT
0701: RLVNLYSSLR GLGSMNYQIH YSRDAEEIIF QLINNDEWDL LSARIHTVSL KWLFQQENII NSLSHQILKF CRSYNLEEAD IIIGNNYQTV NVQTLSELVS
0801: TEDNYGARLF VCLLAQLLEE EGREYDIICV LNVMATMVLV CPAACEQLSL HGIATTIRTW CYLSNSLSTT TYMSILILVF NTLSSVHPET LSVDQSWVAI
0901: TMKMMECSIP SKEVDILSDE SLFVIGILSL ILHLSTNKAL EETSKAILFN TCIISMVNTV VCAASSKGPA LVDHDEGTST GETLIFVLLL HYFAVKSLHA
1001: ILPGFVDWQS FFASTNPSEP LAFIGIRCHD LCRLLHFGST VIKIAASYSL LELFKRISDQ INSNHEELRC TIGYIMSIRS ILEGLVFYND LRVATNCSLC
1101: LSMILGWEKL TKETKVLEES SWCRLIIEEM TVSLAAPALA SQSFMNNQRP AVLVAIALLK LHKIPQWMRS VFDNSSISGI LGNLSASNLS SEILALFREL
1201: LKSNFLSTEQ IATINQMLQE CRKRMYSNNA QEDLPNEPIK KVLTTSYNMG DICEYLIDLM TSEAYLDTGS KKLLEEIELF FSTLSVDNGS CM
0001: MFFQHSQLQN SDHLLHESMA DSNHQSLSPP CANGHRSTIS LRDDQGGTFC LICFSNLVSD PRIPTVHVSY ALHQLSIAIS EPIFLRTLLS SHIHFLVSPL
0101: VHALSSIDDA PIAIQIMDMI SLLCSVEESS IGEDFVERIS DQLSSGALGW SRRQLHMLHC FGVLMSCENI NINSHIRDKE ALVCQLVEGL QLPSEEIRGE
0201: ILFALYKFSA LQFTEQNVDG IEVLSLLCPK LLCLSLEALA KTQRDDVRLN CVALLTILAQ QGLLANSHSN SASSMSLDEV DDDPMQTAEN VAARPCLNVL
0301: FAEAIKGPLL STDSEVQIKT LDLIFHYISQ ESTPSKQIQV MVEENVADYI FEILRLSECK DQVVNSCLRV LDLFSLAEHS FRKRLVIGFP SVIRVLHYVG
0401: EVPCHPFQIQ TLKLISSCIS DFPGIASSSQ VQEIALVLKK MLERYYSQEM GLFPDAFAII CSVFVSLMKT PSFGETADVL TSLQESLRHS ILASLSLPEK
0501: DSTQILHAVY LLNEVYVYCT ASTSINKTIC IELRHCVIDV CTSHLLPWFL SDVNEVNEEA TLGIMETFHS ILLQNSDIQA KEFAELLVSA DWFSFSFGCL
0601: GNFCTDNMKQ RIYLMLSSLV DILLEQKTGS HIRDALHCLP SDPQDLLFLL GQASSNNQEL ASCQSAALLI FHTSSIYNDR LADDKLVLAS LEQYIILNKT
0701: SLICAISDSP ALLNLVNLYG LCRSLQNERY QISYSLEAER IIFHLLNEYE WDLGSINIHL ESLKWLFQQE SISKSLIYQI QKISRNNLIG NEVHNVYGDG
0801: RQRSLTYWFA KLISEGDNYA ATLLVNLLTQ LAEKEEQEND VISILNLMNT IVSIFPTASN NLSMNGIGSV IHRLVSGFSN SSLGTSFRTL LLLVFNILTS
0901: VQPAVLMIDE SWYAVSIKLL NFLSLRDTAI KQNHEDMVVI GILSLVLYHS SDGALVEASR NIVSNSYLVS AINTVVDVAC SKGPALTQCQ DETNIGEALA
1001: FTLLLYFFSL RSLQIVLAGA VDWQTFFGTS TSLETLPVVC IHCHNLCRLM HFGAPQIKLI ASYCLLELLT GLSEQVDIKK EQLQCSSSYL KSMKAVLGGL
1101: VFCDDIRVAT NSALCLSMIL GWEDMEGRTE MLKTSSWYRF IAEEMSVSLA MPCSASSTYV NHHKPAVYLT VAMLRLKNKP VWLRTVFDES CISSMIQNLN
1201: GINISREIVI LFRELMQAEL LNSQQVTKLD RAFQECRKQM HRNGTRDETV EEQVQRKIPS IHDHSEFCNY LVHLMVSNSF GHPSESETYT QKKKQILDEM
1301: EQFSELISTR EGRVSPIQEE TRQMQTERIV
0101: VHALSSIDDA PIAIQIMDMI SLLCSVEESS IGEDFVERIS DQLSSGALGW SRRQLHMLHC FGVLMSCENI NINSHIRDKE ALVCQLVEGL QLPSEEIRGE
0201: ILFALYKFSA LQFTEQNVDG IEVLSLLCPK LLCLSLEALA KTQRDDVRLN CVALLTILAQ QGLLANSHSN SASSMSLDEV DDDPMQTAEN VAARPCLNVL
0301: FAEAIKGPLL STDSEVQIKT LDLIFHYISQ ESTPSKQIQV MVEENVADYI FEILRLSECK DQVVNSCLRV LDLFSLAEHS FRKRLVIGFP SVIRVLHYVG
0401: EVPCHPFQIQ TLKLISSCIS DFPGIASSSQ VQEIALVLKK MLERYYSQEM GLFPDAFAII CSVFVSLMKT PSFGETADVL TSLQESLRHS ILASLSLPEK
0501: DSTQILHAVY LLNEVYVYCT ASTSINKTIC IELRHCVIDV CTSHLLPWFL SDVNEVNEEA TLGIMETFHS ILLQNSDIQA KEFAELLVSA DWFSFSFGCL
0601: GNFCTDNMKQ RIYLMLSSLV DILLEQKTGS HIRDALHCLP SDPQDLLFLL GQASSNNQEL ASCQSAALLI FHTSSIYNDR LADDKLVLAS LEQYIILNKT
0701: SLICAISDSP ALLNLVNLYG LCRSLQNERY QISYSLEAER IIFHLLNEYE WDLGSINIHL ESLKWLFQQE SISKSLIYQI QKISRNNLIG NEVHNVYGDG
0801: RQRSLTYWFA KLISEGDNYA ATLLVNLLTQ LAEKEEQEND VISILNLMNT IVSIFPTASN NLSMNGIGSV IHRLVSGFSN SSLGTSFRTL LLLVFNILTS
0901: VQPAVLMIDE SWYAVSIKLL NFLSLRDTAI KQNHEDMVVI GILSLVLYHS SDGALVEASR NIVSNSYLVS AINTVVDVAC SKGPALTQCQ DETNIGEALA
1001: FTLLLYFFSL RSLQIVLAGA VDWQTFFGTS TSLETLPVVC IHCHNLCRLM HFGAPQIKLI ASYCLLELLT GLSEQVDIKK EQLQCSSSYL KSMKAVLGGL
1101: VFCDDIRVAT NSALCLSMIL GWEDMEGRTE MLKTSSWYRF IAEEMSVSLA MPCSASSTYV NHHKPAVYLT VAMLRLKNKP VWLRTVFDES CISSMIQNLN
1201: GINISREIVI LFRELMQAEL LNSQQVTKLD RAFQECRKQM HRNGTRDETV EEQVQRKIPS IHDHSEFCNY LVHLMVSNSF GHPSESETYT QKKKQILDEM
1301: EQFSELISTR EGRVSPIQEE TRQMQTERIV
Arabidopsis Description
PRD1Protein PRD1 [Source:UniProtKB/Swiss-Prot;Acc:O23277]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.