Factsheet for HORVU5Hr1G120090.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G530300.1	Wheat	cytosol	78.24	86.29
TraesCS5B01G530100.1	Wheat	cytosol	77.72	85.71
TraesCS4A01G343800.3	Wheat	cytosol	77.72	85.47
TraesCS5D01G529100.1	Wheat	cytosol	77.46	85.19
KXG37171	Sorghum	cytosol	63.99	70.57
Zm00001d034796_P005	Maize	cytosol	62.69	69.14
Zm00001d047622_P002	Maize	cytosol	25.65	63.87
Zm00001d007243_P001	Maize	endoplasmic reticulum	27.72	62.21
Os03t0842700-03	Rice	cytosol	23.06	61.38
VIT_18s0089g01070.t01	Wine grape	cytosol	25.39	54.44
GSMUA_Achr6P18560_001	Banana	cytosol	47.93	49.6
Zm00001d004146_P001	Maize	cytosol	32.64	47.01
Zm00001d020119_P001	Maize	cytosol	13.99	40.91
KRH62573	Soybean	endoplasmic reticulum, extracellular	41.19	40.15
Zm00001d004675_P001	Maize	cytosol	21.24	37.44
Zm00001d046521_P001	Maize	nucleus	22.54	36.71
HORVU4Hr1G061320.1	Barley	cytosol	37.31	29.81
CDY24606	Canola	cytosol, mitochondrion, nucleus	4.15	14.29

Protein Annotations

EnsemblPlants:HORVU5Hr1G120090.3	EnsemblPlantsGene:HORVU5Hr1G120090	Gene3D:1.10.246.120	Gene3D:1.20.1050.80	InterPro:IPR003123	InterPro:IPR037191
InterPro:VPS9	InterPro:VPS9_dom_sf	PANTHER:PTHR23101	PANTHER:PTHR23101:SF63	PFAM:PF02204	PFscan:PS51205
SEG:seg	SMART:SM00167	SUPFAM:SSF109993	UniParc:UPI000B4624DA	UniProt:A0A287SXU8	MapMan:22.8.3.1

Description

No Description!

Coordinates

chrchr5H:+:657107469..657111171

Molecular Weight (calculated)

42776.2 Da

IEP (calculated)

5.976

GRAVY (calculated)

-0.312

Length

386 amino acids

Sequence
(BLAST)

001: RAGGDGEPHV GGVAGGLLRL PRPHAPPGGR RTLPLHQEVS PSLWMDTQSN PSPLSPARGS DLTGELYPRS FLAALSLEDP SAEADGARVQ AFFAEMEAAI
101: RGHPLWADAT HQEIDHALEG LEKYIMTKLF DRTFASSPED AAADAEVSDK IGLLQRFVRP HHLDIPKLLN NEASWLIAVK ELQKINSFKS PRDKLLCMMS
201: CCQVINNLLL NVSMSNDRTP SGADEFLPIL IYITIKANPP QLHSNLKFVQ LFRRETKLVS EVEYYLTNLI SAKMFIINVN GQSLSMEETE FQKHMESAKL
301: GNQMSVASPS SPQGLATSTR GLQKQIDAEG FKFPFMDSEI ENLTPEELKQ LHGLYRKTVT KYTLLSKALR KLSIDEDQLL ASVDDS

Best Arabidopsis Sequence Match ( AT3G19770.1 )
(BLAST)

001: MENTDVFLGL HDFLERMRKP SAGDFVKSIK SFIVSFSNNA PDPEKDCAMV QEFFSKMEAA FRAHPLWSGC SEEELDSAGD GLEKYVMTKL FTRVFASNTE
101: EVIADEKLFQ KMSLVQQFIS PENLDIQPTF QNESSWLLAQ KELQKINMYK APRDKLVCIL NCCKVINNLL LNASIASNEN APGADEFLPV LIYVTIKANP
201: PQLHSNLLYI QRYRRESKLV GEAAYFFTNI LSAESFISNI DAKSISLDEA EFEKNMESAR ARISGLDSQT YQTGHGSAPP PRDESTLQKT QSLNPKRENT
301: LFQSKSSDSL SGTNELLNIN SETPMKKAES ISDLENKGAT LLKDTEPSKV FQEYPYIFAS AGDLRIGDVE GLLNSYKQLV FKYVCLTKGL GDGTSLAPSS
401: SPLQASSGFN TSKESEDHRR SSSDVQMTKE TDRSVDDLIR ALHGEGEDVN NLSDVKHEEY GAMLVEGKDE ERDSKVQGEV DAKDIELMKQ IPKREGDNSS
501: SRPAEDEDVG SKQPVTEASE

Arabidopsis Description

VPS9AVPS9A [Source:UniProtKB/TrEMBL;Acc:A0A178VEC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.