Factsheet for Zm00001d004675_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020119_P001	Maize	cytosol	34.25	56.82
Os03t0842700-03	Rice	cytosol	30.14	45.52
Zm00001d047622_P002	Maize	cytosol	28.31	40.0
VIT_18s0089g01070.t01	Wine grape	cytosol	26.94	32.78
Zm00001d004146_P001	Maize	cytosol	37.44	30.6
Zm00001d034796_P005	Maize	cytosol	45.21	28.29
Zm00001d046521_P001	Maize	nucleus	30.14	27.85
KXG37171	Sorghum	cytosol	44.29	27.71
TraesCS5D01G529100.1	Wheat	cytosol	37.9	23.65
TraesCS5B01G530300.1	Wheat	cytosol	37.44	23.43
TraesCS4A01G343800.3	Wheat	cytosol	37.44	23.36
TraesCS5B01G530100.1	Wheat	cytosol	36.99	23.14
HORVU5Hr1G120090.3	Barley	cytosol	37.44	21.24
GSMUA_Achr6P18560_001	Banana	cytosol	31.05	18.23
KRH62573	Soybean	endoplasmic reticulum, extracellular	32.42	17.93
Zm00001d047863_P004	Maize	cytosol	31.96	13.81
Zm00001d007243_P001	Maize	endoplasmic reticulum	6.85	8.72
CDY24606	Canola	cytosol, mitochondrion, nucleus	1.83	3.57

Protein Annotations

EnsemblPlants:Zm00001d004675_P001	EnsemblPlants:Zm00001d004675_T001	EnsemblPlantsGene:Zm00001d004675	Gene3D:1.10.246.120	Gene3D:1.20.1050.80	InterPro:IPR003123
InterPro:IPR037191	InterPro:VPS9	InterPro:VPS9_dom_sf	PANTHER:PTHR23101	PANTHER:PTHR23101:SF63	PFAM:PF02204
PFscan:PS51205	ProteinID:ONM19414.1	SEG:seg	SUPFAM:SSF109993	UniParc:UPI00084391E0	UniProt:A0A1D6EGZ5
MapMan:22.8.3.1	:	:	:	:	:

Description

Vacuolar protein sorting-associated protein 9A

Coordinates

chr2:+:129629091..129630069

Molecular Weight (calculated)

24698.4 Da

IEP (calculated)

7.218

GRAVY (calculated)

0.223

Length

219 amino acids

Sequence
(BLAST)

001: MESAIRDHPL WANATDQEIG HALEGLEKYV MTKLFDRTFG TSTEDVVSDM DISEKIGLLQ QFVKPHHLDI PKVLHNEASW LVTHSELEAS TMRFQSLMFV
101: ISSKDGSTWC ISHFNSILCL IKMKPPKLYY LDINLLASIF KRASIVKHSA LFSPSVINYA LILAVKELQK INSFKAPREK LLCIMSCCLV INNLLLNILS
201: GADEFLPILI YVTIKASNS

Best Arabidopsis Sequence Match ( AT5G09320.1 )
(BLAST)

001: MENTDVVSGL HNFLSKPSAK DFIKSIKSFI VSILNTAPDP EKDCDAVQDF FYKMESAFRA HPLWSGCSDD ELDNAGDGLE KYVMTKLFPR VFASNTEDVI
101: SDEKLFQKIS LVQQFISPEN LDIQPTFQNQ TSWLLAQKEL QKINMYNAPR DKLMCILRCC KVINNLLLNA SIASNQNEPG ADQFLPVLIY VTIKANPPQF
201: HSNLLYIQRY RRQSKLVGEA GYLFTNILSA ESFISNIDAK SLSMDEADFE TKMKSAHARL SGPGSQSYQT DHGAALPTAH NTKRENMLLH TKSTDSFSGT
301: NETLSETPIK KADPITDLEN KGAATLLNDR SEATKIFQEY PYMFASVGDL KIGDVEDLLN NYKQLVFKYV CLSKGLGDAT SLTPCISPLQ ASKVSENHTT
401: LSSDFQTKSE TDRSVDNLFR ALQGEGDNVH NISDVKQ

Arabidopsis Description

VPS9BVacuolar sorting protein 9 (VPS9) domain [Source:TAIR;Acc:AT5G09320]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.