Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047622_P002 | Maize | cytosol | 53.79 | 45.81 |
| Zm00001d004675_P001 | Maize | cytosol | 56.82 | 34.25 |
| Os03t0842700-03 | Rice | cytosol | 36.36 | 33.1 |
| VIT_18s0089g01070.t01 | Wine grape | cytosol | 37.88 | 27.78 |
| Zm00001d046521_P001 | Maize | nucleus | 45.45 | 25.32 |
| Zm00001d004146_P001 | Maize | cytosol | 46.21 | 22.76 |
| Zm00001d034796_P005 | Maize | cytosol | 49.24 | 18.57 |
| KXG37171 | Sorghum | cytosol | 48.48 | 18.29 |
| TraesCS5B01G530300.1 | Wheat | cytosol | 41.67 | 15.71 |
| TraesCS5D01G529100.1 | Wheat | cytosol | 41.67 | 15.67 |
| TraesCS5B01G530100.1 | Wheat | cytosol | 40.91 | 15.43 |
| TraesCS4A01G343800.3 | Wheat | cytosol | 40.91 | 15.38 |
| HORVU5Hr1G120090.3 | Barley | cytosol | 40.91 | 13.99 |
| GSMUA_Achr6P18560_001 | Banana | cytosol | 37.12 | 13.14 |
| KRH62573 | Soybean | endoplasmic reticulum, extracellular | 39.39 | 13.13 |
| Zm00001d047863_P004 | Maize | cytosol | 36.36 | 9.47 |
| Zm00001d007243_P001 | Maize | endoplasmic reticulum | 3.79 | 2.91 |
| CDY24606 | Canola | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d020119_P001 | EnsemblPlants:Zm00001d020119_T001 | EnsemblPlantsGene:Zm00001d020119 | Gene3D:1.20.1050.80 | InterPro:IPR037191 | InterPro:VPS9_dom_sf |
| PANTHER:PTHR23101 | PANTHER:PTHR23101:SF63 | ProteinID:ONM54302.1 | SEG:seg | SUPFAM:SSF109993 | UniParc:UPI0008448D54 |
| UniProt:A0A1D6I279 | MapMan:22.8.3.1 | : | : | : | : |
Description
Vacuolar protein sorting-associated protein 9A
Coordinates
chr7:+:93730685..93731330
Molecular Weight (calculated)
14450.1 Da
IEP (calculated)
4.572
GRAVY (calculated)
-0.124
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVDSRMATE SDSDSDARGG SGSRSETPTA SLSPFVGLEK YVMTKLFDRT FGTSTEDAVS DMDISEKIGL LQLFVKPHHL DIPKVVHNEA SWLVTHSELE
101: ASTMRFQSLM LVINTPNGIF ALTVPALLDC SR
101: ASTMRFQSLM LVINTPNGIF ALTVPALLDC SR
001: MENTDVVSGL HNFLSKPSAK DFIKSIKSFI VSILNTAPDP EKDCDAVQDF FYKMESAFRA HPLWSGCSDD ELDNAGDGLE KYVMTKLFPR VFASNTEDVI
101: SDEKLFQKIS LVQQFISPEN LDIQPTFQNQ TSWLLAQKEL QKINMYNAPR DKLMCILRCC KVINNLLLNA SIASNQNEPG ADQFLPVLIY VTIKANPPQF
201: HSNLLYIQRY RRQSKLVGEA GYLFTNILSA ESFISNIDAK SLSMDEADFE TKMKSAHARL SGPGSQSYQT DHGAALPTAH NTKRENMLLH TKSTDSFSGT
301: NETLSETPIK KADPITDLEN KGAATLLNDR SEATKIFQEY PYMFASVGDL KIGDVEDLLN NYKQLVFKYV CLSKGLGDAT SLTPCISPLQ ASKVSENHTT
401: LSSDFQTKSE TDRSVDNLFR ALQGEGDNVH NISDVKQ
101: SDEKLFQKIS LVQQFISPEN LDIQPTFQNQ TSWLLAQKEL QKINMYNAPR DKLMCILRCC KVINNLLLNA SIASNQNEPG ADQFLPVLIY VTIKANPPQF
201: HSNLLYIQRY RRQSKLVGEA GYLFTNILSA ESFISNIDAK SLSMDEADFE TKMKSAHARL SGPGSQSYQT DHGAALPTAH NTKRENMLLH TKSTDSFSGT
301: NETLSETPIK KADPITDLEN KGAATLLNDR SEATKIFQEY PYMFASVGDL KIGDVEDLLN NYKQLVFKYV CLSKGLGDAT SLTPCISPLQ ASKVSENHTT
401: LSSDFQTKSE TDRSVDNLFR ALQGEGDNVH NISDVKQ
Arabidopsis Description
VPS9BVacuolar sorting protein 9 (VPS9) domain [Source:TAIR;Acc:AT5G09320]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.