Factsheet for Os03t0842700-03

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0089g01070.t01	Wine grape	cytosol	58.62	47.22
Zm00001d020119_P001	Maize	cytosol	33.1	36.36
KXG37171	Sorghum	cytosol	76.55	31.71
TraesCS5D01G529100.1	Wheat	cytosol	75.17	31.05
Zm00001d047622_P002	Maize	cytosol	33.1	30.97
TraesCS5B01G530300.1	Wheat	cytosol	74.48	30.86
Zm00001d034796_P005	Maize	cytosol	74.48	30.86
TraesCS4A01G343800.3	Wheat	cytosol	74.48	30.77
TraesCS5B01G530100.1	Wheat	cytosol	73.1	30.29
Zm00001d004675_P001	Maize	cytosol	45.52	30.14
Zm00001d004146_P001	Maize	cytosol	50.34	27.24
HORVU5Hr1G120090.3	Barley	cytosol	61.38	23.06
GSMUA_Achr6P18560_001	Banana	cytosol	57.93	22.52
Zm00001d046521_P001	Maize	nucleus	33.1	20.25
KRH62573	Soybean	endoplasmic reticulum, extracellular	54.48	19.95
Os03t0262900-02	Rice	cytosol, plasma membrane	46.21	13.96
Zm00001d007243_P001	Maize	endoplasmic reticulum	2.76	2.33
CDY24606	Canola	cytosol, mitochondrion, nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Os03t0842700-03	EnsemblPlantsGene:Os03g0842700	Gene3D:1.10.246.120	InterPro:IPR037191	InterPro:VPS9_dom_sf	PANTHER:PTHR23101
PANTHER:PTHR23101:SF63	ProteinID:AAT77029.1	ProteinID:BAS87307.1	SUPFAM:SSF109993	UniParc:UPI00003FE5E0	UniProt:Q6AVP5
MapMan:22.8.3.1	:	:	:	:	:

Description

Similar to predicted protein. (Os03t0842700-01);Vacuolar sorting protein 9 domain containing protein. (Os03t0842700-02);Similar to predicted protein. (Os03t0842700-03);Conserved hypothetical protein. (Os03t0842700-04)

Coordinates

chr3:+:35424519..35426635

Molecular Weight (calculated)

16428.4 Da

IEP (calculated)

5.228

GRAVY (calculated)

-0.388

Length

145 amino acids

Sequence
(BLAST)

001: MESPTSPASR LDFYDFIGRM RRPAAADLFH SIRSFLASLS QGGEPNAEVD GGRVQTFFAE METAIRDHPL WANATNQEID NALEGLEKYI MTKLFDRAFA
101: SSAEDVKSDM EISEKIGLLQ HFVRPHHLDI PKLLHNEAAW LVRQQ

Best Arabidopsis Sequence Match ( AT3G19770.1 )
(BLAST)

001: MENTDVFLGL HDFLERMRKP SAGDFVKSIK SFIVSFSNNA PDPEKDCAMV QEFFSKMEAA FRAHPLWSGC SEEELDSAGD GLEKYVMTKL FTRVFASNTE
101: EVIADEKLFQ KMSLVQQFIS PENLDIQPTF QNESSWLLAQ KELQKINMYK APRDKLVCIL NCCKVINNLL LNASIASNEN APGADEFLPV LIYVTIKANP
201: PQLHSNLLYI QRYRRESKLV GEAAYFFTNI LSAESFISNI DAKSISLDEA EFEKNMESAR ARISGLDSQT YQTGHGSAPP PRDESTLQKT QSLNPKRENT
301: LFQSKSSDSL SGTNELLNIN SETPMKKAES ISDLENKGAT LLKDTEPSKV FQEYPYIFAS AGDLRIGDVE GLLNSYKQLV FKYVCLTKGL GDGTSLAPSS
401: SPLQASSGFN TSKESEDHRR SSSDVQMTKE TDRSVDDLIR ALHGEGEDVN NLSDVKHEEY GAMLVEGKDE ERDSKVQGEV DAKDIELMKQ IPKREGDNSS
501: SRPAEDEDVG SKQPVTEASE

Arabidopsis Description

VPS9AVPS9A [Source:UniProtKB/TrEMBL;Acc:A0A178VEC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.