Factsheet for Zm00001d046521_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047622_P002	Maize	cytosol	36.71	56.13
Zm00001d020119_P001	Maize	cytosol	25.32	45.45
VIT_18s0089g01070.t01	Wine grape	cytosol	30.38	40.0
Zm00001d004146_P001	Maize	cytosol	40.93	36.19
Os03t0842700-03	Rice	cytosol	20.25	33.1
Zm00001d004675_P001	Maize	cytosol	27.85	30.14
Zm00001d034796_P005	Maize	cytosol	43.88	29.71
KXG37171	Sorghum	cytosol	43.04	29.14
TraesCS5D01G529100.1	Wheat	cytosol	38.82	26.21
TraesCS5B01G530300.1	Wheat	cytosol	38.4	26.0
TraesCS5B01G530100.1	Wheat	cytosol	37.97	25.71
TraesCS4A01G343800.3	Wheat	cytosol	37.97	25.64
HORVU5Hr1G120090.3	Barley	cytosol	36.71	22.54
GSMUA_Achr6P18560_001	Banana	cytosol	31.65	20.11
KRH62573	Soybean	endoplasmic reticulum, extracellular	31.65	18.94
Zm00001d047863_P004	Maize	cytosol	34.6	16.17
Zm00001d007243_P001	Maize	endoplasmic reticulum	5.91	8.14
CDY24606	Canola	cytosol, mitochondrion, nucleus	1.69	3.57

Protein Annotations

Gene3D:1.20.1050.80	MapMan:15.5.4.1	MapMan:22.8.3.1	UniProt:A0A1D6P344	ProteinID:AQL04429.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR003123	InterPro:IPR003165	InterPro:IPR037191	PFAM:PF02171
PFAM:PF02204	PFscan:PS51205	PANTHER:PTHR23101	PANTHER:PTHR23101:SF63	InterPro:Piwi	SUPFAM:SSF109993
UniParc:UPI0008443609	InterPro:VPS9	InterPro:VPS9_dom_sf	EnsemblPlantsGene:Zm00001d046521	EnsemblPlants:Zm00001d046521_P001	EnsemblPlants:Zm00001d046521_T001
SEG:seg	:	:	:	:	:

Description

Vacuolar protein sorting-associated protein 9A

Coordinates

chr9:+:93513252..93518345

Molecular Weight (calculated)

26768.7 Da

IEP (calculated)

9.245

GRAVY (calculated)

-0.177

Length

237 amino acids

Sequence
(BLAST)

001: MAGAGQRVPE GQISGTDAPG GDAAALAARY AGLGLEKYVM TKLFDRTFGT STEDAVSDMD ILEKIGLLQQ FVKPHHLDIP KVLHNEASWL LAVKELQKIN
101: SFKAPREKLL CIMSCCQVIN NSCELRITHR KVGGPLFTRM DLLKLVLKEL KIGTHDILPS NWILARKSAQ RSRVRKLQYI SELERSVTTL QNLCLIEFYT
201: SSWKRKPHQV IISRNDVSES QFNLVLNIEL QQIIDRD

Best Arabidopsis Sequence Match ( AT3G19770.1 )
(BLAST)

001: MENTDVFLGL HDFLERMRKP SAGDFVKSIK SFIVSFSNNA PDPEKDCAMV QEFFSKMEAA FRAHPLWSGC SEEELDSAGD GLEKYVMTKL FTRVFASNTE
101: EVIADEKLFQ KMSLVQQFIS PENLDIQPTF QNESSWLLAQ KELQKINMYK APRDKLVCIL NCCKVINNLL LNASIASNEN APGADEFLPV LIYVTIKANP
201: PQLHSNLLYI QRYRRESKLV GEAAYFFTNI LSAESFISNI DAKSISLDEA EFEKNMESAR ARISGLDSQT YQTGHGSAPP PRDESTLQKT QSLNPKRENT
301: LFQSKSSDSL SGTNELLNIN SETPMKKAES ISDLENKGAT LLKDTEPSKV FQEYPYIFAS AGDLRIGDVE GLLNSYKQLV FKYVCLTKGL GDGTSLAPSS
401: SPLQASSGFN TSKESEDHRR SSSDVQMTKE TDRSVDDLIR ALHGEGEDVN NLSDVKHEEY GAMLVEGKDE ERDSKVQGEV DAKDIELMKQ IPKREGDNSS
501: SRPAEDEDVG SKQPVTEASE

Arabidopsis Description

VPS9AVPS9A [Source:UniProtKB/TrEMBL;Acc:A0A178VEC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.