Factsheet for Zm00001d047622_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020119_P001	Maize	cytosol	45.81	53.79
VIT_18s0089g01070.t01	Wine grape	cytosol	45.81	39.44
Zm00001d004146_P001	Maize	cytosol	67.1	38.81
Zm00001d046521_P001	Maize	nucleus	56.13	36.71
Os03t0842700-03	Rice	cytosol	30.97	33.1
Zm00001d034796_P005	Maize	cytosol	74.19	32.86
KXG37171	Sorghum	cytosol	72.9	32.29
Zm00001d004675_P001	Maize	cytosol	40.0	28.31
TraesCS5B01G530300.1	Wheat	cytosol	61.94	27.43
TraesCS5D01G529100.1	Wheat	cytosol	61.94	27.35
TraesCS5B01G530100.1	Wheat	cytosol	61.29	27.14
TraesCS4A01G343800.3	Wheat	cytosol	61.29	27.07
HORVU5Hr1G120090.3	Barley	cytosol	63.87	25.65
GSMUA_Achr6P18560_001	Banana	cytosol	56.13	23.32
KRH62573	Soybean	endoplasmic reticulum, extracellular	56.13	21.97
Zm00001d047863_P004	Maize	cytosol	56.13	17.16
Zm00001d007243_P001	Maize	endoplasmic reticulum	2.58	2.33
CDY24606	Canola	cytosol, mitochondrion, nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d047622_P002	EnsemblPlants:Zm00001d047622_T002	EnsemblPlantsGene:Zm00001d047622	Gene3D:1.20.1050.80	InterPro:IPR003123	InterPro:IPR037191
InterPro:VPS9	InterPro:VPS9_dom_sf	PANTHER:PTHR23101	PANTHER:PTHR23101:SF63	PFAM:PF02204	PFscan:PS51205
ProteinID:AQL07135.1	SEG:seg	SUPFAM:SSF109993	UniParc:UPI000844CA55	UniProt:A0A1D6PBY2	MapMan:22.8.3.1

Description

Vacuolar protein sorting-associated protein 9A

Coordinates

chr9:-:137329775..137330891

Molecular Weight (calculated)

16987.4 Da

IEP (calculated)

4.756

GRAVY (calculated)

-0.115

Length

155 amino acids

Sequence
(BLAST)

001: MDVDSRMATE SDSDACGGSG SGSETPTASP SPSVGLEKYV MTKLFDRTFG TSTEDVVSDM DISEKIGLLQ QFVKPRHLDI PKVQHNEALW LLAVKELQKI
101: NSFKAPREKL LCIMSCCQVI NNLLLNISMS NDRTLSGADE FLPILIYVTI KASNS

Best Arabidopsis Sequence Match ( AT3G19770.1 )
(BLAST)

001: MENTDVFLGL HDFLERMRKP SAGDFVKSIK SFIVSFSNNA PDPEKDCAMV QEFFSKMEAA FRAHPLWSGC SEEELDSAGD GLEKYVMTKL FTRVFASNTE
101: EVIADEKLFQ KMSLVQQFIS PENLDIQPTF QNESSWLLAQ KELQKINMYK APRDKLVCIL NCCKVINNLL LNASIASNEN APGADEFLPV LIYVTIKANP
201: PQLHSNLLYI QRYRRESKLV GEAAYFFTNI LSAESFISNI DAKSISLDEA EFEKNMESAR ARISGLDSQT YQTGHGSAPP PRDESTLQKT QSLNPKRENT
301: LFQSKSSDSL SGTNELLNIN SETPMKKAES ISDLENKGAT LLKDTEPSKV FQEYPYIFAS AGDLRIGDVE GLLNSYKQLV FKYVCLTKGL GDGTSLAPSS
401: SPLQASSGFN TSKESEDHRR SSSDVQMTKE TDRSVDDLIR ALHGEGEDVN NLSDVKHEEY GAMLVEGKDE ERDSKVQGEV DAKDIELMKQ IPKREGDNSS
501: SRPAEDEDVG SKQPVTEASE

Arabidopsis Description

VPS9AVPS9A [Source:UniProtKB/TrEMBL;Acc:A0A178VEC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.