Factsheet for Zm00001d034796_P005

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37171	Sorghum	cytosol	92.57	92.57
TraesCS5D01G529100.1	Wheat	cytosol	78.86	78.63
TraesCS4A01G343800.3	Wheat	cytosol	78.0	77.78
TraesCS5B01G530300.1	Wheat	cytosol	77.71	77.71
Zm00001d007243_P001	Maize	endoplasmic reticulum	38.0	77.33
TraesCS5B01G530100.1	Wheat	cytosol	77.14	77.14
Os03t0842700-03	Rice	cytosol	30.86	74.48
Zm00001d047622_P002	Maize	cytosol	32.86	74.19
VIT_18s0089g01070.t01	Wine grape	cytosol	34.29	66.67
HORVU5Hr1G120090.3	Barley	cytosol	69.14	62.69
Zm00001d004146_P001	Maize	cytosol	45.43	59.33
GSMUA_Achr6P18560_001	Banana	cytosol	59.71	56.03
Zm00001d020119_P001	Maize	cytosol	18.57	49.24
KRH62573	Soybean	endoplasmic reticulum, extracellular	51.43	45.45
Zm00001d004675_P001	Maize	cytosol	28.29	45.21
Zm00001d046521_P001	Maize	nucleus	29.71	43.88
Zm00001d047863_P004	Maize	cytosol	45.43	31.36
CDY24606	Canola	cytosol, mitochondrion, nucleus	4.57	14.29

Protein Annotations

Gene3D:1.10.246.120	Gene3D:1.20.1050.80	EntrezGene:100216675	MapMan:22.8.3.1	UniProt:B4FJ70	EMBL:BT037158
InterPro:IPR003123	InterPro:IPR037191	ProteinID:ONM11421.1	PFAM:PF02204	PFscan:PS51205	PANTHER:PTHR23101
PANTHER:PTHR23101:SF63	SMART:SM00167	SUPFAM:SSF109993	UniParc:UPI00017B740E	InterPro:VPS9	InterPro:VPS9_dom_sf
EnsemblPlantsGene:Zm00001d034796	EnsemblPlants:Zm00001d034796_P005	EnsemblPlants:Zm00001d034796_T005	SEG:seg	:	:

Description

Vacuolar protein sorting-associated protein 9A

Coordinates

chr1:+:302380972..302387299

Molecular Weight (calculated)

39621.2 Da

IEP (calculated)

5.152

GRAVY (calculated)

-0.287

Length

350 amino acids

Sequence
(BLAST)

001: MESPTSTASR PDFYDFLDRM RRPAAADLFR SIKSFLVSFS FHAPNAEEDG SKVQAFLAEM ESAIRDHPLW ANATDQEIDH ALEGLEKYVI TKLFDRTFGT
101: STEDAVTDMD ISEKIGLLQQ FVKPHHLDIP KVLHNEASWL LAVKELQKIN SFKAPREKLL CIMNCCQVIN NLLLNISMSN DRTLSGADEF LPILIYVTIK
201: ANPPQLHSNL KFIQLFRRET KLISEVEYYL TNLISAKMFI IDVSAHSLSM EESEFQKHME SARLATQVSV ASPSSSQGLP TSARANQEET DMAGSRFPFM
301: DSETESLTPG EVKQLHDLYK RVVTRYTLLS EALRKSSIDE DQLLNSVHDP

Best Arabidopsis Sequence Match ( AT3G19770.1 )
(BLAST)

001: MENTDVFLGL HDFLERMRKP SAGDFVKSIK SFIVSFSNNA PDPEKDCAMV QEFFSKMEAA FRAHPLWSGC SEEELDSAGD GLEKYVMTKL FTRVFASNTE
101: EVIADEKLFQ KMSLVQQFIS PENLDIQPTF QNESSWLLAQ KELQKINMYK APRDKLVCIL NCCKVINNLL LNASIASNEN APGADEFLPV LIYVTIKANP
201: PQLHSNLLYI QRYRRESKLV GEAAYFFTNI LSAESFISNI DAKSISLDEA EFEKNMESAR ARISGLDSQT YQTGHGSAPP PRDESTLQKT QSLNPKRENT
301: LFQSKSSDSL SGTNELLNIN SETPMKKAES ISDLENKGAT LLKDTEPSKV FQEYPYIFAS AGDLRIGDVE GLLNSYKQLV FKYVCLTKGL GDGTSLAPSS
401: SPLQASSGFN TSKESEDHRR SSSDVQMTKE TDRSVDDLIR ALHGEGEDVN NLSDVKHEEY GAMLVEGKDE ERDSKVQGEV DAKDIELMKQ IPKREGDNSS
501: SRPAEDEDVG SKQPVTEASE

Arabidopsis Description

VPS9AVPS9A [Source:UniProtKB/TrEMBL;Acc:A0A178VEC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.