CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38094	Soybean	cytosol	81.06	98.17
KRH34419	Soybean	cytosol	97.73	97.73
KRH65621	Soybean	cytosol	79.55	97.22
KRH07303	Soybean	cytosol	73.48	93.27
KRH31676	Soybean	cytosol	92.42	92.42
EES12512	Sorghum	cytosol	84.85	82.96
Zm00001d025857_P001	Maize	cytosol, extracellular, plastid	83.33	81.48
Zm00001d006287_P001	Maize	plastid	82.58	81.34
Os04t0515300-02	Rice	cytosol	82.58	81.34
Os02t0622300-00	Rice	nucleus, plasma membrane	82.58	81.34
TraesCS6B01G256900.1	Wheat	cytosol	81.06	80.45
TraesCS6A01G224600.1	Wheat	cytosol	81.06	79.85
EER97137	Sorghum	cytosol	81.06	79.85
TraesCS6D01G209400.1	Wheat	cytosol	81.06	79.85
TraesCS2A01G383600.1	Wheat	cytosol	81.06	79.26
TraesCS2B01G400600.1	Wheat	cytosol, golgi, nucleus, unclear	81.06	79.26
TraesCS2D01G379700.1	Wheat	cytosol, golgi, unclear	80.3	78.52
HORVU6Hr1G058560.3	Barley	cytosol	80.3	78.52
HORVU2Hr1G089070.1	Barley	cytosol	80.3	78.52
HORVU2Hr1G089090.1	Barley	cytosol	79.55	77.78
KRH69103	Soybean	nucleus	93.18	70.29
GSMUA_Achr8P19000_001	Banana	mitochondrion	83.33	68.32
GSMUA_Achr11P...	Banana	mitochondrion	83.33	64.71
VIT_11s0118g00670.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	85.61	63.13
Zm00001d021445_P001	Maize	plastid	80.3	61.99
KRH51968	Soybean	mitochondrion	31.82	60.87
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	84.85	56.28
VIT_05s0049g01310.t01	Wine grape	plastid	84.09	50.45
Zm00001d050675_P001	Maize	cytosol	39.39	45.61
KRH16187	Soybean	mitochondrion	29.55	42.86
Zm00001d047509_P001	Maize	cytosol	35.61	41.23
GSMUA_AchrUn_...	Banana	mitochondrion	82.58	32.73

Protein Annotations

EntrezGene:100306120	MapMan:17.1.2.1.15	Gene3D:2.30.30.30	EMBL:ACUP02012746	EMBL:BT090074	UniProt:C6SY27
EnsemblPlantsGene:GLYMA_20G207500	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	GO:GO:0022625	GO:GO:0042273	InterPro:IPR014722	EnsemblPlants:KRG92367	ProteinID:KRG92367
ProteinID:KRG92367.1	PFAM:PF01929	PANTHER:PTHR11127	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L14e_dom	SUPFAM:SSF50104
InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0001B155AB	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:44426256..44427647

Molecular Weight (calculated)

15401.2 Da

IEP (calculated)

11.135

GRAVY (calculated)

-0.445

Length

132 amino acids

Sequence
(BLAST)

001: MPFKRYVEIG RVAQINYGKE YGRLVVIVDV IDQNRALVDA PDMVRSQVNF KRLSLTDIKI DIKRVPKKKD LVKAMEDADV KTKWEKSSWG RKLIVRKRRA
101: SLNDFDRFKI MLAKIKKAAV VRQELAKLRK SA

Best Arabidopsis Sequence Match ( AT4G27090.1 )
(BLAST)

001: MGFKRYVEIG RVALVNYGED HGKLVVIVDV VDQNRALVDA PDMERIQMNF KRLSLTDIVI DINRVPKKKA LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: NLNDFDRFKI MLAKIKKAGV VRQELAKLKK EITA

Arabidopsis Description

RPL14BAT4G27090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.