Factsheet for Os02t0622300-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 19502382
nucleus: 19621931
nucleus: 26035336
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19502382 doi

M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto

Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0515300-02	Rice	cytosol	99.25	99.25
EER97137	Sorghum	cytosol	95.52	95.52
Zm00001d006287_P001	Maize	plastid	94.78	94.78
TraesCS6D01G209400.1	Wheat	cytosol	94.78	94.78
TraesCS6A01G224600.1	Wheat	cytosol	94.78	94.78
TraesCS6B01G256900.1	Wheat	cytosol	94.03	94.74
TraesCS2A01G383600.1	Wheat	cytosol	94.78	94.07
TraesCS2B01G400600.1	Wheat	cytosol, golgi, nucleus, unclear	94.78	94.07
HORVU2Hr1G089070.1	Barley	cytosol	94.03	93.33
TraesCS2D01G379700.1	Wheat	cytosol, golgi, unclear	94.03	93.33
HORVU2Hr1G089090.1	Barley	cytosol	93.28	92.59
HORVU6Hr1G058560.3	Barley	cytosol	93.28	92.59
PGSC0003DMT400038120	Potato	cytosol	88.06	88.06
Solyc09g066430.2.1	Tomato	nucleus	86.57	87.22
Solyc06g083820.2.1	Tomato	nucleus	86.57	87.22
PGSC0003DMT400026640	Potato	cytosol	86.57	87.22
Solyc06g008260.2.1	Tomato	nucleus	86.57	86.57
PGSC0003DMT400051917	Potato	cytosol	85.82	86.47
KRH34419	Soybean	cytosol	83.58	84.85
KRH38094	Soybean	cytosol	68.66	84.4
KRH31676	Soybean	cytosol	82.09	83.33
KRH65621	Soybean	cytosol	67.16	83.33
AT2G20450.1	Thale cress	cytosol	82.84	82.84
KRG92367	Soybean	cytosol	81.34	82.58
Bra026380.1-P	Field mustard	cytosol	82.09	82.09
Bra019070.1-P	Field mustard	cytosol	82.09	82.09
Bra010412.1-P	Field mustard	cytosol	82.09	82.09
AT4G27090.1	Thale cress	cytosol	81.34	81.34
KRH07303	Soybean	cytosol	62.69	80.77
Solyc07g042840.1.1	Tomato	cytosol	51.49	75.82
GSMUA_Achr8P19000_001	Banana	mitochondrion	90.3	75.16
Zm00001d021445_P001	Maize	plastid	94.03	73.68
GSMUA_Achr11P...	Banana	mitochondrion	89.55	70.59
CDY46665	Canola	cytosol, mitochondrion	82.09	69.18
CDX97376	Canola	endoplasmic reticulum, mitochondrion	82.09	68.32
VIT_11s0118g00670.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	89.55	67.04
CDX89280	Canola	golgi, mitochondrion	82.09	65.87
Bra038852.1-P	Field mustard	cytosol	76.12	65.38
CDY29273	Canola	extracellular	82.09	64.71
CDX92779	Canola	cytosol	82.09	63.95
KRH69103	Soybean	nucleus	82.84	63.43
CDY12859	Canola	mitochondrion	26.87	62.07
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	90.3	60.8
CDY14284	Canola	cytosol	82.09	57.89
CDX82664	Canola	cytosol, plastid	80.6	56.84
KRH51968	Soybean	mitochondrion	29.1	56.52
VIT_05s0049g01310.t01	Wine grape	plastid	89.55	54.55
CDY39140	Canola	mitochondrion	54.48	47.71
GSMUA_AchrUn_...	Banana	mitochondrion	88.81	35.74

Protein Annotations

MapMan:17.1.2.1.15	Gene3D:2.30.30.30	EntrezGene:4330020	EntrezGene:4336397	EMBL:AB378378	EMBL:AK062092
EMBL:AK121631	ProteinID:BAD21553.1	ProteinID:BAD22517.1	ProteinID:BAF15224.1	ProteinID:BAS79833.1	ProteinID:BAS90077.1
ProteinID:CAE01917.2	ProteinID:CAE02348.2	ProteinID:EEE61336.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	GO:GO:0042273	InterPro:IPR014722
EnsemblPlantsGene:Os02g0622300	EnsemblPlants:Os02t0622300-00	PFAM:PF01929	PANTHER:PTHR11127	UniProt:Q6K1Q6	InterPro:Rib_L2_dom2
InterPro:Ribosomal_L14e_dom	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0000377C34	RefSeq:XP_015622875.1	RefSeq:XP_015636847.1

Description

Ribosomal protein L14 family protein. (Os02t0622300-00)

Coordinates

chr2:-:24777909..24779595

Molecular Weight (calculated)

15388.2 Da

IEP (calculated)

11.018

GRAVY (calculated)

-0.313

Length

134 amino acids

Sequence
(BLAST)

001: MPFKRFVEIG RVALVNYGKD YGRLVVIVDV VDQNRALVDA PDMVRCQINF KRLSLTDIKI DIKRVPKKTT LIKAMEEADV KNKWENSSWG KKLIVQKRRA
101: SLNDFDRFKV MLAKIKRGGA IRQELAKLKK TAAA

Best Arabidopsis Sequence Match ( AT2G20450.1 )
(BLAST)

001: MGFKRFVEIG RVALVNYGED YGKLVVIVDV VDQNRALVDA PDMERIQMNL KRLSLTDIVI DINRVPKKKV LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: ALNDFDRFKI MLAKIKRAGI VRQELAKLKR EIAA

Arabidopsis Description

RPL14A60S ribosomal protein L14-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.