CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019070.1-P	Field mustard	cytosol	84.28	100.0
AT4G27090.1	Thale cress	cytosol	81.76	97.01
CDX92779	Canola	cytosol	94.34	87.21
Solyc06g083820.2.1	Tomato	nucleus	72.33	86.47
CDX97376	Canola	endoplasmic reticulum, mitochondrion	86.79	85.71
PGSC0003DMT400051917	Potato	cytosol	71.7	85.71
PGSC0003DMT400038120	Potato	cytosol	71.7	85.07
CDX89280	Canola	golgi, mitochondrion	89.31	85.03
Solyc06g008260.2.1	Tomato	nucleus	70.44	83.58
Os04t0515300-02	Rice	cytosol	69.81	82.84
Solyc09g066430.2.1	Tomato	nucleus	69.18	82.71
PGSC0003DMT400026640	Potato	cytosol	69.18	82.71
CDY29273	Canola	extracellular	88.05	82.35
Zm00001d006287_P001	Maize	plastid	69.18	82.09
Os02t0622300-00	Rice	nucleus, plasma membrane	69.18	82.09
EES12512	Sorghum	cytosol	69.18	81.48
TraesCS6A01G224600.1	Wheat	cytosol	68.55	81.34
EER97137	Sorghum	cytosol	68.55	81.34
TraesCS6D01G209400.1	Wheat	cytosol	68.55	81.34
HORVU2Hr1G089070.1	Barley	cytosol	68.55	80.74
Zm00001d025857_P001	Maize	cytosol, extracellular, plastid	68.55	80.74
TraesCS2A01G383600.1	Wheat	cytosol	68.55	80.74
TraesCS2B01G400600.1	Wheat	cytosol, golgi, nucleus, unclear	68.55	80.74
HORVU6Hr1G058560.3	Barley	cytosol	67.92	80.0
HORVU2Hr1G089090.1	Barley	cytosol	67.92	80.0
TraesCS2D01G379700.1	Wheat	cytosol, golgi, unclear	67.92	80.0
TraesCS6B01G256900.1	Wheat	cytosol	66.67	79.7
Solyc07g042840.1.1	Tomato	cytosol	42.14	73.63
CDY14284	Canola	cytosol	87.42	73.16
CDY12859	Canola	mitochondrion	26.42	72.41
GSMUA_Achr8P19000_001	Banana	mitochondrion	72.96	72.05
CDX82664	Canola	cytosol, plastid	80.5	67.37
GSMUA_Achr11P...	Banana	mitochondrion	71.7	67.06
VIT_11s0118g00670.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	72.96	64.8
Zm00001d021445_P001	Maize	plastid	69.18	64.33
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	74.84	59.8
KRH51968	Soybean	mitochondrion	24.53	56.52
CDY39140	Canola	mitochondrion	51.57	53.59
VIT_05s0049g01310.t01	Wine grape	plastid	73.58	53.18
Zm00001d050675_P001	Maize	cytosol	29.56	41.23
Zm00001d047509_P001	Maize	cytosol	27.67	38.6
GSMUA_AchrUn_...	Banana	mitochondrion	68.55	32.73

Protein Annotations

MapMan:17.1.2.1.15	Gene3D:2.30.30.30	GO:A0A078I6Z3	UniProt:A0A078I6Z3	EnsemblPlants:CDY46665	ProteinID:CDY46665
ProteinID:CDY46665.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00085964001	InterPro:IPR014722	PFAM:PF01929
PANTHER:PTHR11127	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L14e_dom	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0004EDB5C3

Description

BnaA03g48430DBnaA03g48430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6Z3]

Coordinates

chrLK032681:+:43990..45466

Molecular Weight (calculated)

18393.1 Da

IEP (calculated)

10.941

GRAVY (calculated)

-0.247

Length

159 amino acids

Sequence
(BLAST)

001: MIIKKCSPQF SLDTLLRTFK LPPAKMVFKR YVEIGRVALV NYGKDHGKLV VIVDVVDQNR ALVDAPDMER IQMNFKRLSL TDIVIEINRV PKKKALIEAM
101: EKADVKNKWE KSSWGRKLIV QKRRASLNDF DRFKIMLAKI KKAGVVRQEL AKLKKEITA

Best Arabidopsis Sequence Match ( AT4G27090.1 )
(BLAST)

001: MGFKRYVEIG RVALVNYGED HGKLVVIVDV VDQNRALVDA PDMERIQMNF KRLSLTDIVI DINRVPKKKA LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: NLNDFDRFKI MLAKIKKAGV VRQELAKLKK EITA

Arabidopsis Description

RPL14BAT4G27090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.