CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026380.1-P	Field mustard	cytosol	83.23	100.0
AT4G27090.1	Thale cress	cytosol	80.75	97.01
CDY46665	Canola	cytosol, mitochondrion	85.71	86.79
Solyc06g083820.2.1	Tomato	nucleus	71.43	86.47
PGSC0003DMT400051917	Potato	cytosol	70.81	85.71
PGSC0003DMT400038120	Potato	cytosol	70.81	85.07
Solyc06g008260.2.1	Tomato	nucleus	69.57	83.58
CDY29273	Canola	extracellular	88.2	83.53
Os04t0515300-02	Rice	cytosol	68.94	82.84
Solyc09g066430.2.1	Tomato	nucleus	68.32	82.71
PGSC0003DMT400026640	Potato	cytosol	68.32	82.71
CDX89280	Canola	golgi, mitochondrion	85.71	82.63
Zm00001d006287_P001	Maize	plastid	68.32	82.09
Os02t0622300-00	Rice	nucleus, plasma membrane	68.32	82.09
EES12512	Sorghum	cytosol	68.32	81.48
EER97137	Sorghum	cytosol	67.7	81.34
TraesCS6D01G209400.1	Wheat	cytosol	67.7	81.34
TraesCS6A01G224600.1	Wheat	cytosol	67.7	81.34
CDX92779	Canola	cytosol	86.34	80.81
HORVU2Hr1G089070.1	Barley	cytosol	67.7	80.74
Zm00001d025857_P001	Maize	cytosol, extracellular, plastid	67.7	80.74
TraesCS2B01G400600.1	Wheat	cytosol, golgi, nucleus, unclear	67.7	80.74
TraesCS2A01G383600.1	Wheat	cytosol	67.7	80.74
HORVU6Hr1G058560.3	Barley	cytosol	67.08	80.0
HORVU2Hr1G089090.1	Barley	cytosol	67.08	80.0
TraesCS2D01G379700.1	Wheat	cytosol, golgi, unclear	67.08	80.0
TraesCS6B01G256900.1	Wheat	cytosol	65.84	79.7
CDY14284	Canola	cytosol	88.82	75.26
Solyc07g042840.1.1	Tomato	cytosol	41.61	73.63
CDY12859	Canola	mitochondrion	26.09	72.41
GSMUA_Achr8P19000_001	Banana	mitochondrion	70.81	70.81
CDX82664	Canola	cytosol, plastid	80.12	67.89
GSMUA_Achr11P...	Banana	mitochondrion	70.81	67.06
VIT_11s0118g00670.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	74.53	67.04
Zm00001d021445_P001	Maize	plastid	67.7	63.74
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	71.43	57.79
KRH51968	Soybean	mitochondrion	24.22	56.52
CDY39140	Canola	mitochondrion	52.8	55.56
VIT_05s0049g01310.t01	Wine grape	plastid	71.43	52.27
Zm00001d050675_P001	Maize	cytosol	31.06	43.86
Zm00001d047509_P001	Maize	cytosol	27.33	38.6
GSMUA_AchrUn_...	Banana	mitochondrion	69.57	33.63

Protein Annotations

MapMan:17.1.2.1.15	Gene3D:2.30.30.30	GO:A0A078E837	EnsemblPlants:CDX97376	ProteinID:CDX97376	ProteinID:CDX97376.1
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00104479001	InterPro:IPR014722	PFAM:PF01929	PANTHER:PTHR11127
InterPro:Rib_L2_dom2	InterPro:Ribosomal_L14e_dom	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0004EE603E	:

Description

BnaC08g12410D

Coordinates

chrLK031899:-:176604..178027

Molecular Weight (calculated)

18478.2 Da

IEP (calculated)

11.102

GRAVY (calculated)

-0.232

Length

161 amino acids

Sequence
(BLAST)

001: MARAKQNTLT LLLVPLRFSP PNLPAAKMVF KRYVEIGRVA LVNYGKDHGK LVVIVDVVDQ NRALVDAPDM ERIQMNFKRL SLTDIVIEIN RVPKKKALIE
101: AMEKADVKNK WEKSSWGRKL IVQKRRASLN DFDRFKIMLA KIKKAGVVRQ ELAKLKKEIT A

Best Arabidopsis Sequence Match ( AT4G27090.1 )
(BLAST)

001: MGFKRYVEIG RVALVNYGED HGKLVVIVDV VDQNRALVDA PDMERIQMNF KRLSLTDIVI DINRVPKKKA LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: NLNDFDRFKI MLAKIKKAGV VRQELAKLKK EITA

Arabidopsis Description

RPL14BAT4G27090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.