Factsheet for Zm00001d021445_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

plastid: 22065420
plastid: 23198870
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97137	Sorghum	cytosol	76.02	97.01
Zm00001d006287_P001	Maize	plastid	74.27	94.78
Os02t0622300-00	Rice	nucleus, plasma membrane	73.68	94.03
TraesCS2D01G379700.1	Wheat	cytosol, golgi, unclear	73.1	92.59
TraesCS6D01G209400.1	Wheat	cytosol	72.51	92.54
TraesCS6A01G224600.1	Wheat	cytosol	72.51	92.54
Zm00001d025857_P001	Maize	cytosol, extracellular, plastid	72.51	91.85
TraesCS2B01G400600.1	Wheat	cytosol, golgi, nucleus, unclear	72.51	91.85
TraesCS2A01G383600.1	Wheat	cytosol	72.51	91.85
TraesCS6B01G256900.1	Wheat	cytosol	71.34	91.73
HORVU2Hr1G089070.1	Barley	cytosol	71.93	91.11
HORVU6Hr1G058560.3	Barley	cytosol	71.34	90.37
HORVU2Hr1G089090.1	Barley	cytosol	71.34	90.37
PGSC0003DMT400026640	Potato	cytosol	67.25	86.47
PGSC0003DMT400038120	Potato	cytosol	67.25	85.82
Solyc09g066430.2.1	Tomato	nucleus	66.67	85.71
Solyc06g008260.2.1	Tomato	nucleus	66.08	84.33
Solyc06g083820.2.1	Tomato	nucleus	64.91	83.46
PGSC0003DMT400051917	Potato	cytosol	64.33	82.71
KRH38094	Soybean	cytosol	52.05	81.65
KRH34419	Soybean	cytosol	62.57	81.06
AT2G20450.1	Thale cress	cytosol	63.16	80.6
KRH65621	Soybean	cytosol	50.88	80.56
KRG92367	Soybean	cytosol	61.99	80.3
Bra026380.1-P	Field mustard	cytosol	62.57	79.85
Bra019070.1-P	Field mustard	cytosol	62.57	79.85
Bra010412.1-P	Field mustard	cytosol	62.57	79.85
AT4G27090.1	Thale cress	cytosol	62.57	79.85
KRH31676	Soybean	cytosol	61.4	79.55
KRH07303	Soybean	cytosol	47.37	77.88
Solyc07g042840.1.1	Tomato	cytosol	39.18	73.63
GSMUA_Achr8P19000_001	Banana	mitochondrion	68.42	72.67
CDY46665	Canola	cytosol, mitochondrion	64.33	69.18
GSMUA_Achr11P...	Banana	mitochondrion	68.42	68.82
Bra038852.1-P	Field mustard	cytosol	62.57	68.59
CDX97376	Canola	endoplasmic reticulum, mitochondrion	63.74	67.7
VIT_11s0118g00670.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	68.42	65.36
CDY29273	Canola	extracellular	64.33	64.71
CDX89280	Canola	golgi, mitochondrion	63.16	64.67
CDX92779	Canola	cytosol	64.91	64.53
CDY12859	Canola	mitochondrion	21.05	62.07
KRH69103	Soybean	nucleus	63.16	61.71
CDY14284	Canola	cytosol	66.67	60.0
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	69.59	59.8
CDX82664	Canola	cytosol, plastid	63.74	57.37
VIT_05s0049g01310.t01	Wine grape	plastid	70.76	55.0
Zm00001d050675_P001	Maize	cytosol	34.5	51.75
KRH51968	Soybean	mitochondrion	20.47	50.72
CDY39140	Canola	mitochondrion	43.86	49.02
Zm00001d047509_P001	Maize	cytosol	31.58	47.37
GSMUA_AchrUn_...	Banana	mitochondrion	70.18	36.04

Protein Annotations

MapMan:17.1.2.1.15	Gene3D:2.30.30.30	UniProt:A0A1D6IB46	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR014722
ProteinID:ONM57178.1	PFAM:PF01929	PANTHER:PTHR11127	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L14e_dom	SUPFAM:SSF50104
InterPro:Translation_prot_SH3-like_sf	UniParc:UPI00084404D4	EnsemblPlantsGene:Zm00001d021445	EnsemblPlants:Zm00001d021445_P001	EnsemblPlants:Zm00001d021445_T001	SEG:seg

Description

60S ribosomal protein L14-1

Coordinates

chr7:-:152358112..152359792

Molecular Weight (calculated)

19305.8 Da

IEP (calculated)

11.338

GRAVY (calculated)

-0.338

Length

171 amino acids

Sequence
(BLAST)

001: MSLPPPNPSF CSDFRRASPS RSSRFTAPPL ASPTAARMPF KRFVEIGRVA LVNYGKDYGR LVVIVDVVDQ NRALVDAPDM VRCQINFKRL SLTDIKIDIK
101: RVPKKSTLIK AMEEADVKTK WENSSWGKKL IVQKRRAALS DFDRFKVMLA RIKRGGAIRQ ELAKLKKAST A

Best Arabidopsis Sequence Match ( AT2G20450.1 )
(BLAST)

001: MGFKRFVEIG RVALVNYGED YGKLVVIVDV VDQNRALVDA PDMERIQMNL KRLSLTDIVI DINRVPKKKV LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: ALNDFDRFKI MLAKIKRAGI VRQELAKLKR EIAA

Arabidopsis Description

RPL14A60S ribosomal protein L14-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.