CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G20450.1	Thale cress	cytosol	54.25	61.94
Solyc06g083820.2.1	Tomato	nucleus	48.37	55.64
PGSC0003DMT400051917	Potato	cytosol	47.71	54.89
Os04t0515300-02	Rice	cytosol	47.71	54.48
Os02t0622300-00	Rice	nucleus, plasma membrane	47.71	54.48
TraesCS6B01G256900.1	Wheat	cytosol	47.06	54.14
TraesCS6D01G209400.1	Wheat	cytosol	47.06	53.73
PGSC0003DMT400038120	Potato	cytosol	47.06	53.73
TraesCS6A01G224600.1	Wheat	cytosol	47.06	53.73
EER97137	Sorghum	cytosol	47.06	53.73
Solyc09g066430.2.1	Tomato	nucleus	46.41	53.38
PGSC0003DMT400026640	Potato	cytosol	46.41	53.38
TraesCS2B01G400600.1	Wheat	cytosol, golgi, nucleus, unclear	47.06	53.33
TraesCS2A01G383600.1	Wheat	cytosol	47.06	53.33
Zm00001d025857_P001	Maize	cytosol, extracellular, plastid	47.06	53.33
HORVU6Hr1G058560.3	Barley	cytosol	47.06	53.33
EES12512	Sorghum	cytosol	47.06	53.33
TraesCS2D01G379700.1	Wheat	cytosol, golgi, unclear	47.06	53.33
Zm00001d006287_P001	Maize	plastid	46.41	52.99
CDX97376	Canola	endoplasmic reticulum, mitochondrion	55.56	52.8
HORVU2Hr1G089070.1	Barley	cytosol	46.41	52.59
HORVU2Hr1G089090.1	Barley	cytosol	46.41	52.59
Solyc06g008260.2.1	Tomato	nucleus	45.75	52.24
CDY46665	Canola	cytosol, mitochondrion	53.59	51.57
Bra038852.1-P	Field mustard	cytosol	52.29	51.28
CDX89280	Canola	golgi, mitochondrion	54.9	50.3
CDY29273	Canola	extracellular	54.9	49.41
CDX92779	Canola	cytosol	54.9	48.84
GSMUA_Achr8P19000_001	Banana	mitochondrion	49.67	47.2
CDX82664	Canola	cytosol, plastid	57.52	46.32
GSMUA_Achr11P...	Banana	mitochondrion	50.98	45.88
CDY14284	Canola	cytosol	54.9	44.21
Zm00001d021445_P001	Maize	plastid	49.02	43.86
VIT_11s0118g00670.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	50.33	43.02
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	51.63	39.7
Zm00001d050675_P001	Maize	cytosol	27.45	36.84
VIT_05s0049g01310.t01	Wine grape	plastid	52.94	36.82
Solyc07g042840.1.1	Tomato	cytosol	20.26	34.07
Zm00001d047509_P001	Maize	cytosol	20.91	28.07
GSMUA_AchrUn_...	Banana	mitochondrion	49.67	22.82
CDY12859	Canola	mitochondrion	4.58	12.07
KRH51968	Soybean	mitochondrion	3.92	8.7

Protein Annotations

MapMan:17.1.2.1.15	Gene3D:2.30.30.30	GO:A0A078HKZ0	UniProt:A0A078HKZ0	EnsemblPlants:CDY39140	ProteinID:CDY39140
ProteinID:CDY39140.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00067316001	InterPro:IPR014722	PFAM:PF01929
PANTHER:PTHR11127	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L14e_dom	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0004EF49FC

Description

BnaA07g01360DBnaA07g01360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HKZ0]

Coordinates

chrLK032441:-:240663..241628

Molecular Weight (calculated)

17495.9 Da

IEP (calculated)

10.543

GRAVY (calculated)

0.026

Length

153 amino acids

Sequence
(BLAST)

001: MGPYLWAHIR NLRPNTKILI AFLLLKVKAK TLILFCVLRL SFPSTEENGK PLIPTSLSSR FCVEAFKRYV EIGRVALVNF GKDYGKLVVI VDVVDQNRAL
101: VDAPDMERIQ MNLKRLSLTD IVIDINRVPK KKILIEAMEK ADVKNKWEKS SRG

Best Arabidopsis Sequence Match ( AT2G20450.1 )
(BLAST)

001: MGFKRFVEIG RVALVNYGED YGKLVVIVDV VDQNRALVDA PDMERIQMNL KRLSLTDIVI DINRVPKKKV LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: ALNDFDRFKI MLAKIKRAGI VRQELAKLKR EIAA

Arabidopsis Description

RPL14A60S ribosomal protein L14-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.