CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G20450.1	Thale cress	cytosol	65.26	92.54
Solyc06g083820.2.1	Tomato	nucleus	59.47	84.96
PGSC0003DMT400051917	Potato	cytosol	58.95	84.21
PGSC0003DMT400038120	Potato	cytosol	58.95	83.58
PGSC0003DMT400026640	Potato	cytosol	57.89	82.71
Solyc09g066430.2.1	Tomato	nucleus	57.89	82.71
Solyc06g008260.2.1	Tomato	nucleus	57.89	82.09
Os04t0515300-02	Rice	cytosol	57.37	81.34
EER97137	Sorghum	cytosol	57.37	81.34
Os02t0622300-00	Rice	nucleus, plasma membrane	56.84	80.6
CDY46665	Canola	cytosol, mitochondrion	67.37	80.5
CDX97376	Canola	endoplasmic reticulum, mitochondrion	67.89	80.12
TraesCS2D01G379700.1	Wheat	cytosol, golgi, unclear	56.84	80.0
EES12512	Sorghum	cytosol	56.84	80.0
TraesCS6D01G209400.1	Wheat	cytosol	56.32	79.85
Zm00001d006287_P001	Maize	plastid	56.32	79.85
TraesCS6A01G224600.1	Wheat	cytosol	56.32	79.85
HORVU2Hr1G089070.1	Barley	cytosol	56.32	79.26
Zm00001d025857_P001	Maize	cytosol, extracellular, plastid	56.32	79.26
TraesCS2A01G383600.1	Wheat	cytosol	56.32	79.26
TraesCS2B01G400600.1	Wheat	cytosol, golgi, nucleus, unclear	56.32	79.26
HORVU2Hr1G089090.1	Barley	cytosol	55.79	78.52
HORVU6Hr1G058560.3	Barley	cytosol	55.79	78.52
Bra038852.1-P	Field mustard	cytosol	64.21	78.21
TraesCS6B01G256900.1	Wheat	cytosol	54.74	78.2
CDX89280	Canola	golgi, mitochondrion	67.89	77.25
CDY29273	Canola	extracellular	67.37	75.29
CDX92779	Canola	cytosol	67.37	74.42
Solyc07g042840.1.1	Tomato	cytosol	35.26	73.63
CDY12859	Canola	mitochondrion	21.05	68.97
CDY14284	Canola	cytosol	68.95	68.95
GSMUA_Achr8P19000_001	Banana	mitochondrion	58.42	68.94
GSMUA_Achr11P...	Banana	mitochondrion	58.95	65.88
VIT_11s0118g00670.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	60.53	64.25
Zm00001d021445_P001	Maize	plastid	57.37	63.74
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	61.58	58.79
CDY39140	Canola	mitochondrion	46.32	57.52
KRH51968	Soybean	mitochondrion	20.0	55.07
VIT_05s0049g01310.t01	Wine grape	plastid	60.0	51.82
Zm00001d050675_P001	Maize	cytosol	25.26	42.11
Zm00001d047509_P001	Maize	cytosol	23.16	38.6
GSMUA_AchrUn_...	Banana	mitochondrion	57.37	32.73

Protein Annotations

MapMan:17.1.2.1.15	Gene3D:2.30.30.30	GO:A0A078D332	EnsemblPlants:CDX82664	ProteinID:CDX82664	ProteinID:CDX82664.1
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00137910001	InterPro:IPR014722	PFAM:PF01929	PANTHER:PTHR11127
InterPro:Rib_L2_dom2	InterPro:Ribosomal_L14e_dom	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0004EED87C	:

Description

BnaC07g02020D

Coordinates

chrLK031829:-:1048330..1049741

Molecular Weight (calculated)

21700.1 Da

IEP (calculated)

11.080

GRAVY (calculated)

-0.212

Length

190 amino acids

Sequence
(BLAST)

001: MVSEALHTVL SYFKSSGGIM ATGNRWPEQR PKTKTLIVKA KTLIVVVSPS RLQPKKMAFK RYVEIGRVAL VNFGKDYGKL VVIVDVVDQN RALVDAPDME
101: RIQMNLKRLS LTDIVIDINR VPKKKILIEA MEKADVKNKW EKSSWGRKLI VQKRRAALND FDRFQIMLAK IKRAGVVRQE LAKLNKEITA

Best Arabidopsis Sequence Match ( AT2G20450.1 )
(BLAST)

001: MGFKRFVEIG RVALVNYGED YGKLVVIVDV VDQNRALVDA PDMERIQMNL KRLSLTDIVI DINRVPKKKV LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: ALNDFDRFKI MLAKIKRAGI VRQELAKLKR EIAA

Arabidopsis Description

RPL14A60S ribosomal protein L14-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.