Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010412.1-P | Field mustard | cytosol | 77.91 | 100.0 |
| AT4G27090.1 | Thale cress | cytosol | 75.58 | 97.01 |
| CDY46665 | Canola | cytosol, mitochondrion | 87.21 | 94.34 |
| Solyc06g083820.2.1 | Tomato | nucleus | 66.86 | 86.47 |
| CDX97376 | Canola | endoplasmic reticulum, mitochondrion | 80.81 | 86.34 |
| PGSC0003DMT400051917 | Potato | cytosol | 66.28 | 85.71 |
| PGSC0003DMT400038120 | Potato | cytosol | 66.28 | 85.07 |
| CDX89280 | Canola | golgi, mitochondrion | 81.4 | 83.83 |
| Solyc06g008260.2.1 | Tomato | nucleus | 65.12 | 83.58 |
| Os04t0515300-02 | Rice | cytosol | 64.53 | 82.84 |
| Solyc09g066430.2.1 | Tomato | nucleus | 63.95 | 82.71 |
| PGSC0003DMT400026640 | Potato | cytosol | 63.95 | 82.71 |
| CDY29273 | Canola | extracellular | 81.4 | 82.35 |
| Zm00001d006287_P001 | Maize | plastid | 63.95 | 82.09 |
| Os02t0622300-00 | Rice | nucleus, plasma membrane | 63.95 | 82.09 |
| EES12512 | Sorghum | cytosol | 63.95 | 81.48 |
| TraesCS6A01G224600.1 | Wheat | cytosol | 63.37 | 81.34 |
| EER97137 | Sorghum | cytosol | 63.37 | 81.34 |
| TraesCS6D01G209400.1 | Wheat | cytosol | 63.37 | 81.34 |
| HORVU2Hr1G089070.1 | Barley | cytosol | 63.37 | 80.74 |
| Zm00001d025857_P001 | Maize | cytosol, extracellular, plastid | 63.37 | 80.74 |
| TraesCS2A01G383600.1 | Wheat | cytosol | 63.37 | 80.74 |
| TraesCS2B01G400600.1 | Wheat | cytosol, golgi, nucleus, unclear | 63.37 | 80.74 |
| HORVU6Hr1G058560.3 | Barley | cytosol | 62.79 | 80.0 |
| HORVU2Hr1G089090.1 | Barley | cytosol | 62.79 | 80.0 |
| TraesCS2D01G379700.1 | Wheat | cytosol, golgi, unclear | 62.79 | 80.0 |
| TraesCS6B01G256900.1 | Wheat | cytosol | 61.63 | 79.7 |
| CDY14284 | Canola | cytosol | 81.4 | 73.68 |
| Solyc07g042840.1.1 | Tomato | cytosol | 38.95 | 73.63 |
| CDY12859 | Canola | mitochondrion | 24.42 | 72.41 |
| GSMUA_Achr8P19000_001 | Banana | mitochondrion | 66.86 | 71.43 |
| GSMUA_Achr11P... | Banana | mitochondrion | 66.86 | 67.65 |
| CDX82664 | Canola | cytosol, plastid | 74.42 | 67.37 |
| VIT_11s0118g00670.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, plastid | 68.6 | 65.92 |
| Zm00001d021445_P001 | Maize | plastid | 64.53 | 64.91 |
| GSMUA_Achr11P... | Banana | cytosol, plasma membrane | 70.93 | 61.31 |
| KRH51968 | Soybean | mitochondrion | 22.67 | 56.52 |
| CDY39140 | Canola | mitochondrion | 48.84 | 54.9 |
| VIT_05s0049g01310.t01 | Wine grape | plastid | 67.44 | 52.73 |
| Zm00001d050675_P001 | Maize | cytosol | 27.91 | 42.11 |
| Zm00001d047509_P001 | Maize | cytosol | 25.58 | 38.6 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 64.53 | 33.33 |
Protein Annotations
| MapMan:17.1.2.1.15 | Gene3D:2.30.30.30 | GO:A0A078DWE9 | EnsemblPlants:CDX92779 | ProteinID:CDX92779 | ProteinID:CDX92779.1 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00154603001 | InterPro:IPR014722 | PFAM:PF01929 | PANTHER:PTHR11127 |
| InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L14e_dom | SUPFAM:SSF50104 | InterPro:Translation_prot_SH3-like_sf | UniParc:UPI0004EE7A0D | : |
Description
BnaC07g40370D
Coordinates
chrLK031873:+:801609..803054
Molecular Weight (calculated)
19692.8 Da
IEP (calculated)
10.704
GRAVY (calculated)
-0.131
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIMKCSPEF SLCCSIHNGP LGISLDTLLR TFKLPPAKMV FKRYVEIGRV ALVNYGKDHG KLVVIVDVVD QNRALVDAPD MERIQMNFKR LSLTDIVIEI
101: NRVPKKKALI EAMEKADVKN KWEKSSWGRK LIVQKRRASL NDFDRFKIML AKIKKAGVVR QELAKLKKEI TA
101: NRVPKKKALI EAMEKADVKN KWEKSSWGRK LIVQKRRASL NDFDRFKIML AKIKKAGVVR QELAKLKKEI TA
001: MGFKRYVEIG RVALVNYGED HGKLVVIVDV VDQNRALVDA PDMERIQMNF KRLSLTDIVI DINRVPKKKA LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: NLNDFDRFKI MLAKIKKAGV VRQELAKLKK EITA
101: NLNDFDRFKI MLAKIKKAGV VRQELAKLKK EITA
Arabidopsis Description
RPL14BAT4G27090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHP0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.