CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025857_P001	Maize	cytosol, extracellular, plastid	98.52	98.52
Os04t0515300-02	Rice	cytosol	95.56	96.27
EER97137	Sorghum	cytosol	93.33	94.03
PGSC0003DMT400038120	Potato	cytosol	88.15	88.81
Solyc09g066430.2.1	Tomato	nucleus	86.67	87.97
PGSC0003DMT400026640	Potato	cytosol	86.67	87.97
Solyc06g008260.2.1	Tomato	nucleus	86.67	87.31
Solyc06g083820.2.1	Tomato	nucleus	85.19	86.47
KRH38094	Soybean	cytosol	69.63	86.24
PGSC0003DMT400051917	Potato	cytosol	84.44	85.71
KRH34419	Soybean	cytosol	83.7	85.61
KRH65621	Soybean	cytosol	68.15	85.19
KRG92367	Soybean	cytosol	82.96	84.85
KRH31676	Soybean	cytosol	82.22	84.09
AT2G20450.1	Thale cress	cytosol	82.22	82.84
KRH07303	Soybean	cytosol	63.7	82.69
Bra026380.1-P	Field mustard	cytosol	81.48	82.09
Bra019070.1-P	Field mustard	cytosol	81.48	82.09
Bra010412.1-P	Field mustard	cytosol	81.48	82.09
AT4G27090.1	Thale cress	cytosol	80.74	81.34
Solyc07g042840.1.1	Tomato	cytosol	51.85	76.92
GSMUA_Achr8P19000_001	Banana	mitochondrion	89.63	75.16
GSMUA_Achr11P...	Banana	mitochondrion	88.89	70.59
CDY46665	Canola	cytosol, mitochondrion	81.48	69.18
CDX97376	Canola	endoplasmic reticulum, mitochondrion	81.48	68.32
VIT_11s0118g00670.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	90.37	68.16
CDX89280	Canola	golgi, mitochondrion	81.48	65.87
Bra038852.1-P	Field mustard	cytosol	74.81	64.74
CDY29273	Canola	extracellular	81.48	64.71
KRH69103	Soybean	nucleus	82.96	64.0
CDX92779	Canola	cytosol	81.48	63.95
CDY12859	Canola	mitochondrion	27.41	63.79
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	89.63	60.8
CDY14284	Canola	cytosol	81.48	57.89
CDX82664	Canola	cytosol, plastid	80.0	56.84
KRH51968	Soybean	mitochondrion	28.89	56.52
VIT_05s0049g01310.t01	Wine grape	plastid	88.89	54.55
CDY39140	Canola	mitochondrion	53.33	47.06
GSMUA_AchrUn_...	Banana	mitochondrion	86.67	35.14

Protein Annotations

MapMan:17.1.2.1.15	Gene3D:2.30.30.30	EntrezGene:8054273	UniProt:C5YC29	EnsemblPlants:EES12512	ProteinID:EES12512
ProteinID:EES12512.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	GO:GO:0022625	GO:GO:0042273	InterPro:IPR014722	PFAM:PF01929	PANTHER:PTHR11127
InterPro:Rib_L2_dom2	InterPro:Ribosomal_L14e_dom	EnsemblPlantsGene:SORBI_3006G147000	SUPFAM:SSF50104	unigene:Sbi.45	InterPro:Translation_prot_SH3-like_sf
UniParc:UPI0001A8736D	RefSeq:XP_002448184.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:50855833..50858144

Molecular Weight (calculated)

15490.4 Da

IEP (calculated)

11.018

GRAVY (calculated)

-0.257

Length

135 amino acids

Sequence
(BLAST)

001: MPFKRFVEIG RVALVNYGKE YGRLVVIVDV VDQNRALVDA PDMVRCQMNF KRLSLTDIKI DIKRVPKKTT LIKAMEEADV KTKWENSSWG KKLIVQKRRA
101: SLNDFDRFKI MLAKIKRGGA IRQELAKLKK VAAAA

Best Arabidopsis Sequence Match ( AT2G20450.1 )
(BLAST)

001: MGFKRFVEIG RVALVNYGED YGKLVVIVDV VDQNRALVDA PDMERIQMNL KRLSLTDIVI DINRVPKKKV LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: ALNDFDRFKI MLAKIKRAGI VRQELAKLKR EIAA

Arabidopsis Description

RPL14A60S ribosomal protein L14-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.