Factsheet for GSMUA_AchrUn_randomP16630_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
nucleus 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0622300-00	Rice	nucleus, plasma membrane	35.74	88.81
Os04t0515300-02	Rice	cytosol	35.74	88.81
Zm00001d025857_P001	Maize	cytosol, extracellular, plastid	35.44	87.41
EER97137	Sorghum	cytosol	35.14	87.31
EES12512	Sorghum	cytosol	35.14	86.67
Zm00001d006287_P001	Maize	plastid	34.83	86.57
PGSC0003DMT400051917	Potato	cytosol	34.53	86.47
TraesCS6D01G209400.1	Wheat	cytosol	34.53	85.82
TraesCS6A01G224600.1	Wheat	cytosol	34.53	85.82
PGSC0003DMT400038120	Potato	cytosol	34.53	85.82
PGSC0003DMT400026640	Potato	cytosol	34.23	85.71
Solyc06g083820.2.1	Tomato	nucleus	34.23	85.71
KRH38094	Soybean	cytosol	27.93	85.32
TraesCS2B01G400600.1	Wheat	cytosol, golgi, nucleus, unclear	34.53	85.19
TraesCS2A01G383600.1	Wheat	cytosol	34.53	85.19
Solyc09g066430.2.1	Tomato	nucleus	33.93	84.96
TraesCS6B01G256900.1	Wheat	cytosol	33.93	84.96
KRH34419	Soybean	cytosol	33.63	84.85
TraesCS2D01G379700.1	Wheat	cytosol, golgi, unclear	34.23	84.44
HORVU2Hr1G089070.1	Barley	cytosol	34.23	84.44
Solyc06g008260.2.1	Tomato	nucleus	33.93	84.33
KRH65621	Soybean	cytosol	27.33	84.26
KRH31676	Soybean	cytosol	33.33	84.09
HORVU6Hr1G058560.3	Barley	cytosol	33.93	83.7
HORVU2Hr1G089090.1	Barley	cytosol	33.93	83.7
KRG92367	Soybean	cytosol	32.73	82.58
KRH07303	Soybean	cytosol	25.53	81.73
GSMUA_Achr8P19000_001	Banana	mitochondrion	39.04	80.75
Bra010412.1-P	Field mustard	cytosol	32.43	80.6
Bra026380.1-P	Field mustard	cytosol	32.43	80.6
Bra019070.1-P	Field mustard	cytosol	32.43	80.6
AT4G27090.1	Thale cress	cytosol	32.13	79.85
AT2G20450.1	Thale cress	cytosol	31.83	79.1
Solyc07g042840.1.1	Tomato	cytosol	20.72	75.82
GSMUA_Achr11P...	Banana	mitochondrion	38.14	74.71
Zm00001d021445_P001	Maize	plastid	36.04	70.18
VIT_11s0118g00670.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	37.54	69.83
CDX97376	Canola	endoplasmic reticulum, mitochondrion	33.63	69.57
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	41.44	69.35
CDY46665	Canola	cytosol, mitochondrion	32.73	68.55
KRH69103	Soybean	nucleus	34.83	66.29
CDY29273	Canola	extracellular	33.63	65.88
Bra038852.1-P	Field mustard	cytosol	30.63	65.38
CDX89280	Canola	golgi, mitochondrion	32.73	65.27
CDX92779	Canola	cytosol	33.33	64.53
CDY12859	Canola	mitochondrion	11.11	63.79
CDY14284	Canola	cytosol	33.33	58.42
CDX82664	Canola	cytosol, plastid	32.73	57.37
VIT_05s0049g01310.t01	Wine grape	plastid	37.84	57.27
KRH51968	Soybean	mitochondrion	11.71	56.52
CDY39140	Canola	mitochondrion	22.82	49.67
Zm00001d050675_P001	Maize	cytosol	15.32	44.74
Zm00001d047509_P001	Maize	cytosol	14.11	41.23

Protein Annotations

MapMan:17.1.2.1.15	Gene3D:2.30.30.30	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSMUA_AchrUn_randomG16630_001	EnsemblPlants:GSMUA_AchrUn_randomP16630_001
EnsemblPlants:GSMUA_AchrUn_randomT16630_001	InterPro:IPR014722	UniProt:M0U9S2	PFAM:PF01929	PANTHER:PTHR11127	InterPro:Rib_L2_dom2
InterPro:Ribosomal_L14e_dom	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI00029484FC	SEG:seg	:

Description

60S ribosomal protein L14-2 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG16630_001]

Coordinates

chrchrUn_random:+:78329507..78333462

Molecular Weight (calculated)

37487.0 Da

IEP (calculated)

10.309

GRAVY (calculated)

-0.610

Length

333 amino acids

Sequence
(BLAST)

001: MADLRRSSPK TLLRHHSGSR ILLGSDDSTS CNLMHKLNCK QNKSFSGLSD QSERNGVCNR GGRESERSEY IEISVAPDLG NSSKSELADS CIGIQGDERQ
101: RGPAKNQRLF TTDAERETCD EKFVGREDNT YEREGTLSTP SHFVVARPRP FWYIASCPRS DGQGGKIKSR TIRKPYRCFT ALSLERGGTL SLSLSLALEM
201: PFKRYVEIGR VALVTYGKEY GRLVVIVDVI DQNRALVDSP DMVRGQINFK RLSLTDIKID IPRVPKKKTL LDAMEAADVK NKWENSSWGR KLIVQKRRAS
301: LNDFDRFKVM LAKIKRGGAI RQELAKLKKA DVA

Best Arabidopsis Sequence Match ( AT4G27090.1 )
(BLAST)

001: MGFKRYVEIG RVALVNYGED HGKLVVIVDV VDQNRALVDA PDMERIQMNF KRLSLTDIVI DINRVPKKKA LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: NLNDFDRFKI MLAKIKKAGV VRQELAKLKK EITA

Arabidopsis Description

RPL14BAT4G27090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.