CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38094	Soybean	cytosol	93.27	88.99
KRH65621	Soybean	cytosol	92.31	88.89
KRH34419	Soybean	cytosol	93.27	73.48
KRG92367	Soybean	cytosol	93.27	73.48
KRH31676	Soybean	cytosol	87.5	68.94
EES12512	Sorghum	cytosol	82.69	63.7
Zm00001d025857_P001	Maize	cytosol, extracellular, plastid	81.73	62.96
Zm00001d006287_P001	Maize	plastid	80.77	62.69
Os02t0622300-00	Rice	nucleus, plasma membrane	80.77	62.69
Os04t0515300-02	Rice	cytosol	80.77	62.69
TraesCS6B01G256900.1	Wheat	cytosol	78.85	61.65
HORVU2Hr1G089070.1	Barley	cytosol	79.81	61.48
HORVU2Hr1G089090.1	Barley	cytosol	79.81	61.48
TraesCS6D01G209400.1	Wheat	cytosol	78.85	61.19
TraesCS6A01G224600.1	Wheat	cytosol	78.85	61.19
EER97137	Sorghum	cytosol	78.85	61.19
HORVU6Hr1G058560.3	Barley	cytosol	78.85	60.74
TraesCS2A01G383600.1	Wheat	cytosol	78.85	60.74
TraesCS2B01G400600.1	Wheat	cytosol, golgi, nucleus, unclear	78.85	60.74
TraesCS2D01G379700.1	Wheat	cytosol, golgi, unclear	77.88	60.0
GSMUA_Achr8P19000_001	Banana	mitochondrion	83.65	54.04
KRH69103	Soybean	nucleus	88.46	52.57
GSMUA_Achr11P...	Banana	mitochondrion	82.69	50.59
VIT_11s0118g00670.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	84.62	49.16
Zm00001d021445_P001	Maize	plastid	77.88	47.37
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	83.65	43.72
KRH51968	Soybean	mitochondrion	27.88	42.03
VIT_05s0049g01310.t01	Wine grape	plastid	82.69	39.09
Zm00001d050675_P001	Maize	cytosol	40.38	36.84
KRH16187	Soybean	mitochondrion	29.81	34.07
Zm00001d047509_P001	Maize	cytosol	36.54	33.33
GSMUA_AchrUn_...	Banana	mitochondrion	81.73	25.53

Protein Annotations

MapMan:17.1.2.1.15	Gene3D:2.30.30.30	UniProt:A0A0R0FMT8	EMBL:ACUP02009962	EnsemblPlantsGene:GLYMA_16G080300	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR014722	EnsemblPlants:KRH07303	ProteinID:KRH07303	ProteinID:KRH07303.1	PFAM:PF01929
PANTHER:PTHR11127	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L14e_dom	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0006EDCF0F

Description

hypothetical protein

Coordinates

chr16:-:8560734..8561280

Molecular Weight (calculated)

12198.3 Da

IEP (calculated)

11.246

GRAVY (calculated)

-0.270

Length

104 amino acids

Sequence
(BLAST)

001: RYVQIRRVAQ INYGKEYGML VVIVDVIDHN RALIDAPDMV RSQVNFKRLS LTDIKIDIKR VPKKKGLVKA MEDSSWGRKL IVRKRRASLN DFDRFKIMLA
101: KIKV

Best Arabidopsis Sequence Match ( AT2G20450.1 )
(BLAST)

001: MGFKRFVEIG RVALVNYGED YGKLVVIVDV VDQNRALVDA PDMERIQMNL KRLSLTDIVI DINRVPKKKV LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: ALNDFDRFKI MLAKIKRAGI VRQELAKLKR EIAA

Arabidopsis Description

RPL14A60S ribosomal protein L14-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.