CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34419	Soybean	cytosol	94.7	94.7
KRH38094	Soybean	cytosol	76.52	92.66
KRG92367	Soybean	cytosol	92.42	92.42
KRH65621	Soybean	cytosol	75.0	91.67
KRH07303	Soybean	cytosol	68.94	87.5
EES12512	Sorghum	cytosol	84.09	82.22
Os02t0622300-00	Rice	nucleus, plasma membrane	83.33	82.09
Os04t0515300-02	Rice	cytosol	83.33	82.09
Zm00001d025857_P001	Maize	cytosol, extracellular, plastid	83.33	81.48
TraesCS6B01G256900.1	Wheat	cytosol	81.82	81.2
TraesCS6D01G209400.1	Wheat	cytosol	81.82	80.6
TraesCS6A01G224600.1	Wheat	cytosol	81.82	80.6
Zm00001d006287_P001	Maize	plastid	81.82	80.6
TraesCS2A01G383600.1	Wheat	cytosol	81.82	80.0
TraesCS2B01G400600.1	Wheat	cytosol, golgi, nucleus, unclear	81.82	80.0
HORVU2Hr1G089070.1	Barley	cytosol	81.06	79.26
HORVU6Hr1G058560.3	Barley	cytosol	81.06	79.26
TraesCS2D01G379700.1	Wheat	cytosol, golgi, unclear	81.06	79.26
EER97137	Sorghum	cytosol	80.3	79.1
HORVU2Hr1G089090.1	Barley	cytosol	80.3	78.52
KRH69103	Soybean	nucleus	99.24	74.86
GSMUA_Achr8P19000_001	Banana	mitochondrion	85.61	70.19
GSMUA_Achr11P...	Banana	mitochondrion	85.61	66.47
VIT_11s0118g00670.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	87.88	64.8
Zm00001d021445_P001	Maize	plastid	79.55	61.4
KRH51968	Soybean	mitochondrion	31.82	60.87
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	87.12	57.79
VIT_05s0049g01310.t01	Wine grape	plastid	86.36	51.82
Zm00001d050675_P001	Maize	cytosol	37.12	42.98
KRH16187	Soybean	mitochondrion	28.79	41.76
Zm00001d047509_P001	Maize	cytosol	33.33	38.6
GSMUA_AchrUn_...	Banana	mitochondrion	84.09	33.33

Protein Annotations

EntrezGene:100808592	MapMan:17.1.2.1.15	Gene3D:2.30.30.30	EMBL:ACUP02006074	EnsemblPlantsGene:GLYMA_10G004300	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625
GO:GO:0042273	UniProt:I1L7F3	InterPro:IPR014722	EnsemblPlants:KRH31676	ProteinID:KRH31676	ProteinID:KRH31676.1
PFAM:PF01929	PANTHER:PTHR11127	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L14e_dom	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf
UniParc:UPI000233C38C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:428043..429915

Molecular Weight (calculated)

15412.2 Da

IEP (calculated)

11.169

GRAVY (calculated)

-0.413

Length

132 amino acids

Sequence
(BLAST)

001: MPFKRYVEIG RVAQINYGKE YGRLVIIVDV IDQNRALVDA PDMVRSQVNF KRLSLTDIKI DIKRIPKKKD LIQAMEAADV KNRWEKSSWG RKLIVQKRRA
101: SLNDFDRFKI MLAKIKRAAV VRQELAKLKK SA

Best Arabidopsis Sequence Match ( AT4G27090.1 )
(BLAST)

001: MGFKRYVEIG RVALVNYGED HGKLVVIVDV VDQNRALVDA PDMERIQMNF KRLSLTDIVI DINRVPKKKA LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: NLNDFDRFKI MLAKIKKAGV VRQELAKLKK EITA

Arabidopsis Description

RPL14BAT4G27090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.