Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G209400.1 | Wheat | cytosol | 97.74 | 97.01 |
| TraesCS6A01G224600.1 | Wheat | cytosol | 97.74 | 97.01 |
| TraesCS2B01G400600.1 | Wheat | cytosol, golgi, nucleus, unclear | 97.74 | 96.3 |
| HORVU6Hr1G058560.3 | Barley | cytosol | 95.49 | 94.07 |
| Os02t0622300-00 | Rice | nucleus, plasma membrane | 94.74 | 94.03 |
| Zm00001d006287_P001 | Maize | plastid | 92.48 | 91.79 |
| EER97137 | Sorghum | cytosol | 92.48 | 91.79 |
| PGSC0003DMT400038120 | Potato | cytosol | 88.72 | 88.06 |
| Solyc09g066430.2.1 | Tomato | nucleus | 87.97 | 87.97 |
| PGSC0003DMT400026640 | Potato | cytosol | 87.97 | 87.97 |
| Solyc06g008260.2.1 | Tomato | nucleus | 87.22 | 86.57 |
| Solyc06g083820.2.1 | Tomato | nucleus | 86.47 | 86.47 |
| PGSC0003DMT400051917 | Potato | cytosol | 85.71 | 85.71 |
| KRH38094 | Soybean | cytosol | 67.67 | 82.57 |
| KRH31676 | Soybean | cytosol | 81.2 | 81.82 |
| KRH34419 | Soybean | cytosol | 81.2 | 81.82 |
| KRH65621 | Soybean | cytosol | 66.17 | 81.48 |
| KRG92367 | Soybean | cytosol | 80.45 | 81.06 |
| AT2G20450.1 | Thale cress | cytosol | 81.2 | 80.6 |
| Bra026380.1-P | Field mustard | cytosol | 79.7 | 79.1 |
| Bra019070.1-P | Field mustard | cytosol | 79.7 | 79.1 |
| Bra010412.1-P | Field mustard | cytosol | 79.7 | 79.1 |
| KRH07303 | Soybean | cytosol | 61.65 | 78.85 |
| AT4G27090.1 | Thale cress | cytosol | 78.95 | 78.36 |
| Solyc07g042840.1.1 | Tomato | cytosol | 51.13 | 74.73 |
| GSMUA_Achr8P19000_001 | Banana | mitochondrion | 87.97 | 72.67 |
| Zm00001d021445_P001 | Maize | plastid | 91.73 | 71.34 |
| GSMUA_Achr11P... | Banana | mitochondrion | 87.97 | 68.82 |
| CDY46665 | Canola | cytosol, mitochondrion | 79.7 | 66.67 |
| CDX97376 | Canola | endoplasmic reticulum, mitochondrion | 79.7 | 65.84 |
| VIT_11s0118g00670.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, plastid | 87.97 | 65.36 |
| CDX89280 | Canola | golgi, mitochondrion | 79.7 | 63.47 |
| CDY29273 | Canola | extracellular | 79.7 | 62.35 |
| KRH69103 | Soybean | nucleus | 81.95 | 62.29 |
| Bra038852.1-P | Field mustard | cytosol | 72.93 | 62.18 |
| CDX92779 | Canola | cytosol | 79.7 | 61.63 |
| GSMUA_Achr11P... | Banana | cytosol, plasma membrane | 87.97 | 58.79 |
| CDY12859 | Canola | mitochondrion | 24.81 | 56.9 |
| CDY14284 | Canola | cytosol | 79.7 | 55.79 |
| CDX82664 | Canola | cytosol, plastid | 78.2 | 54.74 |
| VIT_05s0049g01310.t01 | Wine grape | plastid | 87.97 | 53.18 |
| KRH51968 | Soybean | mitochondrion | 26.32 | 50.72 |
| CDY39140 | Canola | mitochondrion | 54.14 | 47.06 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 84.96 | 33.93 |
Protein Annotations
| MapMan:17.1.2.1.15 | Gene3D:2.30.30.30 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR014722 |
| PFAM:PF01929 | PANTHER:PTHR11127 | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L14e_dom | SUPFAM:SSF50104 | EnsemblPlantsGene:TraesCS6B01G256900 |
| EnsemblPlants:TraesCS6B01G256900.1 | InterPro:Translation_prot_SH3-like_sf | TIGR:cd06088 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6B:+:461333392..461334597
Molecular Weight (calculated)
15291.1 Da
IEP (calculated)
10.896
GRAVY (calculated)
-0.268
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFKRFVEIG RVALVNYGKD YGRLVVIVDV VDQNRALVDA PDMVRCQMNF KRLSLTDIKI DIKRIPKKAT LIKAMEEADV KTKWENSSWG KKLVVQKRRA
101: SLNDFDRFKV MLAKIKRGGA IRQELAKLKE VAA
101: SLNDFDRFKV MLAKIKRGGA IRQELAKLKE VAA
001: MGFKRFVEIG RVALVNYGED YGKLVVIVDV VDQNRALVDA PDMERIQMNL KRLSLTDIVI DINRVPKKKV LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: ALNDFDRFKI MLAKIKRAGI VRQELAKLKR EIAA
101: ALNDFDRFKI MLAKIKRAGI VRQELAKLKR EIAA
Arabidopsis Description
RPL14A60S ribosomal protein L14-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.