Factsheet for Zm00001d006287_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0622300-00	Rice	nucleus, plasma membrane	94.78	94.78
Zm00001d025857_P001	Maize	cytosol, extracellular, plastid	94.03	93.33
TraesCS6D01G209400.1	Wheat	cytosol	93.28	93.28
TraesCS6A01G224600.1	Wheat	cytosol	93.28	93.28
TraesCS2B01G400600.1	Wheat	cytosol, golgi, nucleus, unclear	93.28	92.59
TraesCS2A01G383600.1	Wheat	cytosol	93.28	92.59
TraesCS6B01G256900.1	Wheat	cytosol	91.79	92.48
TraesCS2D01G379700.1	Wheat	cytosol, golgi, unclear	92.54	91.85
HORVU2Hr1G089070.1	Barley	cytosol	92.54	91.85
HORVU2Hr1G089090.1	Barley	cytosol	91.79	91.11
HORVU6Hr1G058560.3	Barley	cytosol	91.79	91.11
PGSC0003DMT400038120	Potato	cytosol	86.57	86.57
Solyc06g008260.2.1	Tomato	nucleus	86.57	86.57
PGSC0003DMT400026640	Potato	cytosol	85.07	85.71
Solyc09g066430.2.1	Tomato	nucleus	84.33	84.96
KRH38094	Soybean	cytosol	68.66	84.4
Solyc06g083820.2.1	Tomato	nucleus	83.58	84.21
PGSC0003DMT400051917	Potato	cytosol	82.84	83.46
KRH65621	Soybean	cytosol	67.16	83.33
KRH34419	Soybean	cytosol	82.09	83.33
AT4G27090.1	Thale cress	cytosol	82.84	82.84
KRG92367	Soybean	cytosol	81.34	82.58
AT2G20450.1	Thale cress	cytosol	82.09	82.09
Bra010412.1-P	Field mustard	cytosol	82.09	82.09
Bra019070.1-P	Field mustard	cytosol	82.09	82.09
Bra026380.1-P	Field mustard	cytosol	82.09	82.09
KRH31676	Soybean	cytosol	80.6	81.82
KRH07303	Soybean	cytosol	62.69	80.77
Zm00001d021445_P001	Maize	plastid	94.78	74.27
Solyc07g042840.1.1	Tomato	cytosol	50.0	73.63
GSMUA_Achr8P19000_001	Banana	mitochondrion	87.31	72.67
CDY46665	Canola	cytosol, mitochondrion	82.09	69.18
CDX97376	Canola	endoplasmic reticulum, mitochondrion	82.09	68.32
GSMUA_Achr11P...	Banana	mitochondrion	86.57	68.24
CDX89280	Canola	golgi, mitochondrion	82.09	65.87
VIT_11s0118g00670.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	86.57	64.8
Bra038852.1-P	Field mustard	cytosol	75.37	64.74
CDY29273	Canola	extracellular	82.09	64.71
CDX92779	Canola	cytosol	82.09	63.95
CDY12859	Canola	mitochondrion	27.61	63.79
KRH69103	Soybean	nucleus	81.34	62.29
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	87.31	58.79
CDY14284	Canola	cytosol	82.09	57.89
CDX82664	Canola	cytosol, plastid	79.85	56.32
KRH51968	Soybean	mitochondrion	27.61	53.62
VIT_05s0049g01310.t01	Wine grape	plastid	86.57	52.73
Zm00001d050675_P001	Maize	cytosol	43.28	50.88
Zm00001d047509_P001	Maize	cytosol	41.04	48.25
CDY39140	Canola	mitochondrion	52.99	46.41
GSMUA_AchrUn_...	Banana	mitochondrion	86.57	34.83

Protein Annotations

EntrezGene:100192835	MapMan:17.1.2.1.15	Gene3D:2.30.30.30	UniProt:B4FCU1	EMBL:BT034929	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR014722	ProteinID:ONM23277.1	PFAM:PF01929	PANTHER:PTHR11127	InterPro:Rib_L2_dom2
InterPro:Ribosomal_L14e_dom	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI00017B684A	EnsemblPlantsGene:Zm00001d006287	EnsemblPlants:Zm00001d006287_P001
EnsemblPlants:Zm00001d006287_T001	:	:	:	:	:

Description

60S ribosomal protein L14-1

Coordinates

chr2:+:203642768..203644284

Molecular Weight (calculated)

15348.1 Da

IEP (calculated)

10.896

GRAVY (calculated)

-0.292

Length

134 amino acids

Sequence
(BLAST)

001: MPFKRFVEIG RVALVNYGED YGRLVVIVDV VDQNRALVDA PDMVRCQVNF KRLSLTDIKI DIKRVPKKTA LIKAMEEADV KTKWENSSWG KKLIVQKRRA
101: SLNDFDRFKV MLAKIKRGGA IRQELAKLKK ASTA

Best Arabidopsis Sequence Match ( AT4G27090.1 )
(BLAST)

001: MGFKRYVEIG RVALVNYGED HGKLVVIVDV VDQNRALVDA PDMERIQMNF KRLSLTDIVI DINRVPKKKA LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: NLNDFDRFKI MLAKIKKAGV VRQELAKLKK EITA

Arabidopsis Description

RPL14BAT4G27090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.