Factsheet for Bra019070.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010412.1-P	Field mustard	cytosol	100.0	100.0
Bra026380.1-P	Field mustard	cytosol	100.0	100.0
AT4G27090.1	Thale cress	cytosol	97.01	97.01
Solyc06g083820.2.1	Tomato	nucleus	85.82	86.47
PGSC0003DMT400051917	Potato	cytosol	85.07	85.71
PGSC0003DMT400038120	Potato	cytosol	85.07	85.07
CDY46665	Canola	cytosol, mitochondrion	100.0	84.28
Solyc06g008260.2.1	Tomato	nucleus	83.58	83.58
Os04t0515300-02	Rice	cytosol	82.84	82.84
Solyc09g066430.2.1	Tomato	nucleus	82.09	82.71
PGSC0003DMT400026640	Potato	cytosol	82.09	82.71
Zm00001d006287_P001	Maize	plastid	82.09	82.09
Os02t0622300-00	Rice	nucleus, plasma membrane	82.09	82.09
EES12512	Sorghum	cytosol	82.09	81.48
TraesCS6D01G209400.1	Wheat	cytosol	81.34	81.34
EER97137	Sorghum	cytosol	81.34	81.34
TraesCS6A01G224600.1	Wheat	cytosol	81.34	81.34
HORVU2Hr1G089070.1	Barley	cytosol	81.34	80.74
Zm00001d025857_P001	Maize	cytosol, extracellular, plastid	81.34	80.74
TraesCS2A01G383600.1	Wheat	cytosol	81.34	80.74
TraesCS2B01G400600.1	Wheat	cytosol, golgi, nucleus, unclear	81.34	80.74
HORVU6Hr1G058560.3	Barley	cytosol	80.6	80.0
HORVU2Hr1G089090.1	Barley	cytosol	80.6	80.0
TraesCS2D01G379700.1	Wheat	cytosol, golgi, unclear	80.6	80.0
TraesCS6B01G256900.1	Wheat	cytosol	79.1	79.7
Bra038852.1-P	Field mustard	cytosol	85.82	73.72
Solyc07g042840.1.1	Tomato	cytosol	50.0	73.63
GSMUA_Achr8P19000_001	Banana	mitochondrion	83.58	69.57
GSMUA_Achr11P...	Banana	mitochondrion	83.58	65.88
VIT_11s0118g00670.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	84.33	63.13
Zm00001d021445_P001	Maize	plastid	79.85	62.57
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	85.07	57.29
KRH51968	Soybean	mitochondrion	29.1	56.52
VIT_05s0049g01310.t01	Wine grape	plastid	84.33	51.36
Zm00001d050675_P001	Maize	cytosol	35.07	41.23
Zm00001d047509_P001	Maize	cytosol	32.84	38.6
GSMUA_AchrUn_...	Banana	mitochondrion	80.6	32.43

Protein Annotations

MapMan:17.1.2.1.15	Gene3D:2.30.30.30	EnsemblPlantsGene:Bra019070	EnsemblPlants:Bra019070.1	EnsemblPlants:Bra019070.1-P	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR014722	UniProt:M4D1R2	PFAM:PF01929	PANTHER:PTHR11127	InterPro:Rib_L2_dom2
InterPro:Ribosomal_L14e_dom	SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0001BA8EC4	:	:

Description

AT4G27090 (E=2e-068) | 60S ribosomal protein L14 (RPL14B)

Coordinates

chrA03:-:26466359..26467359

Molecular Weight (calculated)

15534.4 Da

IEP (calculated)

10.889

GRAVY (calculated)

-0.301

Length

134 amino acids

Sequence
(BLAST)

001: MVFKRYVEIG RVALVNYGKD HGKLVVIVDV VDQNRALVDA PDMERIQMNF KRLSLTDIVI EINRVPKKKA LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: SLNDFDRFKI MLAKIKKAGV VRQELAKLKK EITA

Best Arabidopsis Sequence Match ( AT4G27090.1 )
(BLAST)

001: MGFKRYVEIG RVALVNYGED HGKLVVIVDV VDQNRALVDA PDMERIQMNF KRLSLTDIVI DINRVPKKKA LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: NLNDFDRFKI MLAKIKKAGV VRQELAKLKK EITA

Arabidopsis Description

RPL14BAT4G27090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.