Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12512 | Sorghum | cytosol | 68.16 | 90.37 |
| Zm00001d025857_P001 | Maize | cytosol, extracellular, plastid | 67.6 | 89.63 |
| Os04t0515300-02 | Rice | cytosol | 67.04 | 89.55 |
| Os02t0622300-00 | Rice | nucleus, plasma membrane | 67.04 | 89.55 |
| KRH38094 | Soybean | cytosol | 53.63 | 88.07 |
| TraesCS6D01G209400.1 | Wheat | cytosol | 65.92 | 88.06 |
| TraesCS6A01G224600.1 | Wheat | cytosol | 65.92 | 88.06 |
| TraesCS6B01G256900.1 | Wheat | cytosol | 65.36 | 87.97 |
| KRH31676 | Soybean | cytosol | 64.8 | 87.88 |
| KRH34419 | Soybean | cytosol | 64.8 | 87.88 |
| TraesCS2B01G400600.1 | Wheat | cytosol, golgi, nucleus, unclear | 65.92 | 87.41 |
| TraesCS2A01G383600.1 | Wheat | cytosol | 65.92 | 87.41 |
| KRH65621 | Soybean | cytosol | 52.51 | 87.04 |
| HORVU6Hr1G058560.3 | Barley | cytosol | 65.36 | 86.67 |
| TraesCS2D01G379700.1 | Wheat | cytosol, golgi, unclear | 65.36 | 86.67 |
| HORVU2Hr1G089070.1 | Barley | cytosol | 65.36 | 86.67 |
| Zm00001d006287_P001 | Maize | plastid | 64.8 | 86.57 |
| EER97137 | Sorghum | cytosol | 64.8 | 86.57 |
| HORVU2Hr1G089090.1 | Barley | cytosol | 64.8 | 85.93 |
| KRG92367 | Soybean | cytosol | 63.13 | 85.61 |
| KRH07303 | Soybean | cytosol | 49.16 | 84.62 |
| Bra010412.1-P | Field mustard | cytosol | 63.13 | 84.33 |
| Bra019070.1-P | Field mustard | cytosol | 63.13 | 84.33 |
| Bra026380.1-P | Field mustard | cytosol | 63.13 | 84.33 |
| AT4G27090.1 | Thale cress | cytosol | 62.57 | 83.58 |
| AT2G20450.1 | Thale cress | cytosol | 62.01 | 82.84 |
| GSMUA_Achr8P19000_001 | Banana | mitochondrion | 70.39 | 78.26 |
| CDX97376 | Canola | endoplasmic reticulum, mitochondrion | 67.04 | 74.53 |
| GSMUA_Achr11P... | Banana | mitochondrion | 70.39 | 74.12 |
| CDY46665 | Canola | cytosol, mitochondrion | 64.8 | 72.96 |
| CDX89280 | Canola | golgi, mitochondrion | 65.36 | 70.06 |
| CDY29273 | Canola | extracellular | 66.48 | 70.0 |
| CDX92779 | Canola | cytosol | 65.92 | 68.6 |
| KRH69103 | Soybean | nucleus | 67.04 | 68.57 |
| Zm00001d021445_P001 | Maize | plastid | 65.36 | 68.42 |
| Bra038852.1-P | Field mustard | cytosol | 59.22 | 67.95 |
| GSMUA_Achr11P... | Banana | cytosol, plasma membrane | 70.95 | 63.82 |
| CDY12859 | Canola | mitochondrion | 20.67 | 63.79 |
| VIT_05s0049g01310.t01 | Wine grape | plastid | 77.65 | 63.18 |
| CDY14284 | Canola | cytosol | 65.36 | 61.58 |
| CDX82664 | Canola | cytosol, plastid | 64.25 | 60.53 |
| CDY39140 | Canola | mitochondrion | 43.02 | 50.33 |
| Zm00001d050675_P001 | Maize | cytosol | 29.61 | 46.49 |
| Zm00001d047509_P001 | Maize | cytosol | 26.82 | 42.11 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 69.83 | 37.54 |
Protein Annotations
| EntrezGene:100260208 | wikigene:100260208 | MapMan:17.1.2.1.15 | Gene3D:2.30.30.30 | ProteinID:CBI25584 | ProteinID:CBI25584.3 |
| UniProt:D7T502 | EMBL:FN595515 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022625 | GO:GO:0042273 | InterPro:IPR014722 | EntrezGene:LOC100260208 |
| wikigene:LOC100260208 | PFAM:PF01929 | PANTHER:PTHR11127 | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L14e_dom | SUPFAM:SSF50104 |
| TMHMM:TMhelix | InterPro:Translation_prot_SH3-like_sf | UniParc:UPI0001BE2B56 | ArrayExpress:VIT_11s0118g00670 | EnsemblPlantsGene:VIT_11s0118g00670 | EnsemblPlants:VIT_11s0118g00670.t01 |
| RefSeq:XP_002267370 | RefSeq:XP_002267370.1 | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:6448350..6449988
Molecular Weight (calculated)
20699.9 Da
IEP (calculated)
11.178
GRAVY (calculated)
-0.177
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MKWVELDLHL IWASRKRPKG FSAVSTFILL FCIVRLSALS HAQAKMPFKR YVEIGRVALV NYGKEYGRLV VIVDVIDQNR ALVDAPDMVR CQMNFKRLSL
101: TDIKIDIKRV PKKKTLIEAM NAADVKNKWE NSSWGRKLIV QKRRASLNDF DRFKIMLAKI KRGGVIRQEL AKLKKQTAS
101: TDIKIDIKRV PKKKTLIEAM NAADVKNKWE NSSWGRKLIV QKRRASLNDF DRFKIMLAKI KRGGVIRQEL AKLKKQTAS
001: MGFKRYVEIG RVALVNYGED HGKLVVIVDV VDQNRALVDA PDMERIQMNF KRLSLTDIVI DINRVPKKKA LIEAMEKADV KNKWEKSSWG RKLIVQKRRA
101: NLNDFDRFKI MLAKIKKAGV VRQELAKLKK EITA
101: NLNDFDRFKI MLAKIKKAGV VRQELAKLKK EITA
Arabidopsis Description
RPL14BAT4G27090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHP0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.