Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73817 | Soybean | nucleus | 87.27 | 91.01 |
| VIT_19s0090g01240.t01 | Wine grape | nucleus | 58.11 | 66.43 |
| Solyc07g064980.2.1 | Tomato | nucleus | 55.85 | 65.38 |
| PGSC0003DMT400057424 | Potato | nucleus | 55.03 | 64.27 |
| Bra026406.1-P | Field mustard | cytosol | 51.13 | 59.43 |
| CDX94288 | Canola | cytosol | 50.72 | 58.95 |
| CDX89306 | Canola | cytosol | 50.72 | 58.95 |
| AT4G26750.1 | Thale cress | cytosol | 49.49 | 57.24 |
| GSMUA_Achr3P10980_001 | Banana | nucleus | 47.43 | 55.53 |
| GSMUA_Achr9P19810_001 | Banana | cytosol | 46.41 | 49.56 |
| GSMUA_Achr9P12660_001 | Banana | nucleus | 42.09 | 49.52 |
| EER88310 | Sorghum | nucleus | 47.84 | 49.16 |
| TraesCS7D01G225200.1 | Wheat | cytosol | 47.64 | 47.64 |
| Zm00001d037417_P002 | Maize | nucleus | 47.23 | 47.62 |
| TraesCS7B01G190400.1 | Wheat | cytosol | 47.43 | 47.43 |
| HORVU7Hr1G045860.5 | Barley | cytosol | 47.43 | 47.24 |
| Os06t0308800-01 | Rice | nucleus | 47.23 | 47.13 |
| TraesCS7A01G223600.1 | Wheat | cytosol | 46.41 | 46.41 |
| Zm00001d045870_P001 | Maize | nucleus | 48.25 | 41.59 |
| Zm00001d037415_P002 | Maize | cytosol | 23.0 | 38.62 |
Protein Annotations
| EMBL:ACUP02008496 | EnsemblPlants:KRH14310 | EnsemblPlantsGene:GLYMA_14G018200 | EntrezGene:100783739 | Gene3D:1.20.5.420 | Gene3D:1.25.40.270 |
| InterPro:IPR023175 | InterPro:VPS_Vta1/CALS_N | PANTHER:PTHR12741 | PANTHER:PTHR12741:SF4 | PFAM:PF04652 | ProteinID:KRH14310 |
| ProteinID:KRH14310.1 | SEG:seg | UniParc:UPI000233BF7F | UniProt:I1M6L7 | MapMan:22.5.4.4.2 | : |
Description
hypothetical protein
Coordinates
chr14:-:1307893..1310855
Molecular Weight (calculated)
54139.6 Da
IEP (calculated)
6.045
GRAVY (calculated)
-0.969
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MANENEPAKL LLPYLQRADE LQKHEPLVAY YCRLYAMERG LKIPQSERTK TTNALLVSLM KQLEKDKKSI QLGPEDNLYL EGFALNVFGK ADKQDRAGRA
101: DLNTAKTFYA ASIFFEILNQ FGAVQPDLEQ KQKYAVWKAA EIRKALKEGR KPTAGPPDGD EDLSVPLSSS SDRYDLGTTE TTVSSPGPES DSSHSYHSPV
201: NYQNLPSIQP TPKFHDTVND QHSADIPPSM PFHDRVDNNK HSSVVSPSSH SYTLGVYPSQ DYHSPPPSQD YHPPPPSQDY HSPPPSQDYH HPPPSQDYHH
301: PPPSQDYHPP PPSQDYHPAP PSQDYHPPPA RSESSYPEPY NHQQYSPENS QHLGPNYPSH ETSSFSYPHF QSYPSFTESS LPSVPSNYTY YQGSDASYSS
401: QSAPLTTNHS SSAQHSSGSR NGTVVEPKPT TQTYQYDSSY QPAPEKIAEA HKAARFAVGA LAFDDVSIAV DYLKKSLELL TNPSAGQ
101: DLNTAKTFYA ASIFFEILNQ FGAVQPDLEQ KQKYAVWKAA EIRKALKEGR KPTAGPPDGD EDLSVPLSSS SDRYDLGTTE TTVSSPGPES DSSHSYHSPV
201: NYQNLPSIQP TPKFHDTVND QHSADIPPSM PFHDRVDNNK HSSVVSPSSH SYTLGVYPSQ DYHSPPPSQD YHPPPPSQDY HSPPPSQDYH HPPPSQDYHH
301: PPPSQDYHPP PPSQDYHPAP PSQDYHPPPA RSESSYPEPY NHQQYSPENS QHLGPNYPSH ETSSFSYPHF QSYPSFTESS LPSVPSNYTY YQGSDASYSS
401: QSAPLTTNHS SSAQHSSGSR NGTVVEPKPT TQTYQYDSSY QPAPEKIAEA HKAARFAVGA LAFDDVSIAV DYLKKSLELL TNPSAGQ
001: MSNPNEPARA LLPYLQRADE LQKHEPLVAY YCRLYAMERG LKIPQSERTK TTNSILMSLI NQLEKDKKSL TLSPDDNMHV EGFALSVFAK ADKQDRAGRA
101: DLGTAKTFYA ASIFFEILSQ FGPVPPDIEQ KHKYAAWKAA DIRKAIKEGR KPTPGDPVDD DTDLSIPSSG PSGSYDHSAS DTNTTSHHRT ELDPPHDSND
201: DSSHHQFPEV PQHPLPPRFY DNPTNDYPAD VPPPPPSSYP SNDHLPPPTG PSDSPYPHPY SHQPYHQDPP KHMPPPQNYS SHEPSPNSLP NFQSYPSFSE
301: SSLPSTSPHY PSHYQNPEPY YSSPHSAPAP SSTSFSSAPP PPPYSSNGRI NIAPVLDPAP SSAQKYHYDS SYQPGPEKVA EALKAARFAV GALAFDEVST
401: AVEHLKKSLE LLTNPSAGAG H
101: DLGTAKTFYA ASIFFEILSQ FGPVPPDIEQ KHKYAAWKAA DIRKAIKEGR KPTPGDPVDD DTDLSIPSSG PSGSYDHSAS DTNTTSHHRT ELDPPHDSND
201: DSSHHQFPEV PQHPLPPRFY DNPTNDYPAD VPPPPPSSYP SNDHLPPPTG PSDSPYPHPY SHQPYHQDPP KHMPPPQNYS SHEPSPNSLP NFQSYPSFSE
301: SSLPSTSPHY PSHYQNPEPY YSSPHSAPAP SSTSFSSAPP PPPYSSNGRI NIAPVLDPAP SSAQKYHYDS SYQPGPEKVA EALKAARFAV GALAFDEVST
401: AVEHLKKSLE LLTNPSAGAG H
Arabidopsis Description
LIP5EXT-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178UUB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.