CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
PTS1:	peroxisome
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g12380.t01	Wine grape	peroxisome	72.97	71.59
CDY29235	Canola	peroxisome, plasma membrane, vacuole	65.25	65.25
CDY36483	Canola	plasma membrane	65.25	65.25
KRH39309	Soybean	cytosol, peroxisome, plasma membrane	65.64	64.15
KRH48364	Soybean	cytosol, peroxisome, plasma membrane	65.64	64.15
AT2G18460.1	Thale cress	plasma membrane	65.64	62.04
Solyc04g071760.2.1	Tomato	golgi, peroxisome, vacuole	63.71	62.03
PGSC0003DMT400038585	Potato	extracellular	62.93	60.82
PGSC0003DMT400016307	Potato	golgi, peroxisome, plasma membrane	62.93	60.59
Solyc02g085380.2.1	Tomato	cytosol, peroxisome, plasma membrane	63.32	60.52
Zm00001d023653_P001	Maize	golgi, peroxisome, vacuole	63.32	58.99
GSMUA_Achr1P27070_001	Banana	golgi, peroxisome, plasma membrane	63.32	58.78
EES15972	Sorghum	golgi, peroxisome, vacuole	61.78	57.35
KRH64114	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	54.44	54.65
KRH53827	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	54.05	54.26
Os12t0482600-01	Rice	endoplasmic reticulum, mitochondrion, plastid	35.91	52.25

Protein Annotations

EMBL:ACUP02008569	EnsemblPlants:KRH15223	EnsemblPlantsGene:GLYMA_14G075700	EntrezGene:100804577	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0016020	GO:GO:0016021	InterPro:DUF502
PANTHER:PTHR31876	PANTHER:PTHR31876:SF6	PFAM:PF04367	ProteinID:KRH15223	ProteinID:KRH15223.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000233B2AA	UniProt:I1M8D7	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr14:+:6341178..6343560

Molecular Weight (calculated)

28681.9 Da

IEP (calculated)

8.969

GRAVY (calculated)

0.297

Length

259 amino acids

Sequence
(BLAST)

001: MASRDLELLI PVSSISENGP KSSAPSSPSV TSTQNHSSHE AFSKVIRSWA SKKFMSGCVI LLPIAITFYV TWGFIRFVDG FFSPIYNHLG INIFGLGFIT
101: SITFIFLVGI FMSSWLGTSV LTLGEWFIKK MPLVSYIYAA SKQISAAISP DQSSKAFKEV AIIKHPRVGE YALGFITSSV VLRNRDEKEL FCVYIPTNHL
201: YLGDIYLISP EDILRPNLSV REAIEIVISG GMSIPQILTT VDADHAKFAP RKPTYESKV

Best Arabidopsis Sequence Match ( AT2G18460.1 )
(BLAST)

001: METRERDLER LIPMHKSGAS PRDVVLSVPP SPLASPIHVA GKEAIYKVIR SWASKKFMTG CVILLPIAVT FYFTWWFIHF VDGFFSPIYT HLGINMFGLG
101: FVTSITFIFM VGVFMSSWLG ASVLSIGEWF IKKMPLVSYI YSASKQISGA ISPDQSSGAF KEVAIIRHPH MGEYAFGFIT STVILRGRAG GEELCCVYVP
201: TNHLYLGDIF LISSKDIIRP NLSVREGIEI VISGGMSIPH MLTTLDSETI HRMLESFGIL EFGDVCLSLV LAWT

Arabidopsis Description

LCV3Protein LIKE COV 3 [Source:UniProtKB/Swiss-Prot;Acc:F4IQJ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.