CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90820	Soybean	plastid	68.65	49.61
GSMUA_Achr1P22410_001	Banana	mitochondrion	51.35	46.12
VIT_01s0011g03590.t01	Wine grape	plastid	60.54	42.75
Solyc05g009370.2.1	Tomato	plastid	60.54	41.33
PGSC0003DMT400037705	Potato	plastid	61.08	40.94
Bra025174.1-P	Field mustard	plastid	58.92	40.37
CDY13600	Canola	plastid	57.84	39.48
AT3G25920.1	Thale cress	plastid	58.38	38.99
CDX83573	Canola	plastid	58.38	38.85
CDY70691	Canola	plastid	58.38	38.57
CDY04186	Canola	plastid	57.84	38.35
Bra017341.1-P	Field mustard	plastid	57.84	38.21
Os03t0219900-01	Rice	plastid	54.05	38.02
Zm00001d028240_P001	Maize	plastid	54.59	37.83
EER95259	Sorghum	plastid	54.59	37.55
TraesCS4B01G242800.1	Wheat	plastid	53.51	37.5
TraesCS4A01G065400.1	Wheat	plastid	52.97	36.98
TraesCS4D01G242400.1	Wheat	plastid	52.97	36.98
KRH13797	Soybean	mitochondrion	25.41	16.79
KRH43653	Soybean	mitochondrion	24.86	16.43
KRH13508	Soybean	cytosol	8.11	14.56

Protein Annotations

MapMan:17.7.2.1.13	Gene3D:3.100.10.10	UniProt:A0A0R0I064	EMBL:ACUP02006714	EnsemblPlantsGene:GLYMA_10G273900	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015934	GO:GO:0019538	GO:GO:0030529	EnsemblPlants:KRH35950	ProteinID:KRH35950	ProteinID:KRH35950.1
InterPro:L18e/L15P_sf	HAMAP:MF_01341	PFAM:PF00828	ScanProsite:PS00475	PANTHER:PTHR12934	PANTHER:PTHR12934:SF11
InterPro:Ribosomal_L15	InterPro:Ribosomal_L15_CS	InterPro:Ribosomal_L15_bac-type	InterPro:Ribosomal_L18e/L15P	SUPFAM:SSF52080	TIGRFAMs:TIGR01071
UniParc:UPI0006ED607F	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:49658268..49662000

Molecular Weight (calculated)

20239.7 Da

IEP (calculated)

10.806

GRAVY (calculated)

-0.630

Length

185 amino acids

Sequence
(BLAST)

001: MMHHYSLTRG EKQKGKRQND NQEKEGTVKS LVAKPWLKVE QARPLVSSVG IRGISAGQGA SCGFGMRGQK SRSGPAVTIG FEGGQMPLYR RIPKLRGIAG
101: ETEDAKFKEG EEVSLEFLKA KGVINTSGRE RRLPLKILGE GELSKKLTLK ARAFSTSAKE KLENVGCSLT VLPGRKKWVK PSDNC

Best Arabidopsis Sequence Match ( AT3G25920.1 )
(BLAST)

001: MATPLSISSN PLTSRHCYRL HLSSTSFKGN VSVLGANPSQ ILSLKLNQTL KTRNQQQFAR PLVVVSQTAA TSSAVVAPER FRLDNLGPQP GSRKKQKRKG
101: RGISAGQGAS CGFGMRGQKS RSGPGIMRGF EGGQTALYRR LPKLRGIAGG MRSGLPKYLP VNIKDIETAG FQEGDEVSLE TLKQKGLINP SGRERKLPLK
201: ILGTGELSMK LTFKARAFST QAKEKLEASG CTLTVLPGRK KWVKPSVAKN QARADEYFAK KRAAAAEAAT SEPAASA

Arabidopsis Description

RPL1550S ribosomal protein L15, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P25873]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.