CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13797	Soybean	mitochondrion	99.03	36.43
KRH43653	Soybean	mitochondrion	97.09	35.71
VIT_13s0019g04930.t01	Wine grape	mitochondrion	78.64	28.62
Solyc02g081310.2.1	Tomato	plastid	76.7	28.01
PGSC0003DMT400043119	Potato	mitochondrion, plastid	75.73	27.66
Bra024320.1-P	Field mustard	mitochondrion, plastid	74.76	27.4
CDY08860	Canola	mitochondrion, plastid	74.76	27.4
AT5G64670.1	Thale cress	mitochondrion, plastid	74.76	27.4
CDY18700	Canola	mitochondrion, plastid	73.79	27.34
CDX81240	Canola	mitochondrion, plastid	73.79	27.05
CDX84541	Canola	mitochondrion, plastid	73.79	27.05
Bra037788.1-P	Field mustard	mitochondrion, plastid	72.82	26.98
Zm00001d040588_P004	Maize	mitochondrion	74.76	26.83
EES00619	Sorghum	mitochondrion	73.79	26.03
TraesCS3A01G268300.1	Wheat	mitochondrion	71.84	25.17
GSMUA_Achr11P...	Banana	mitochondrion	71.84	25.17
Os08t0310100-01	Rice	nucleus	71.84	25.08
TraesCS3D01G268400.1	Wheat	mitochondrion	71.84	24.92
TraesCS3B01G302700.1	Wheat	mitochondrion	70.87	24.58
HORVU3Hr1G062510.1	Barley	plastid	70.87	22.32
KRH35950	Soybean	cytosol	14.56	8.11
KRG90820	Soybean	plastid	17.48	7.03
HORVU5Hr1G041420.1	Barley	endoplasmic reticulum	0.0	0.0
HORVU4Hr1G078100.1	Barley	plastid	0.0	0.0

Protein Annotations

EntrezGene:102667246	MapMan:17.7.1.1.13	Gene3D:3.100.10.10	EMBL:ACUP02009740	EnsemblPlantsGene:GLYMA_15G244400	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005762	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015934	GO:GO:0019538	UniProt:K7MDM5	EnsemblPlants:KRH13508
ProteinID:KRH13508	ProteinID:KRH13508.1	InterPro:L18e/L15P_sf	PANTHER:PTHR12934	PANTHER:PTHR12934:SF12	InterPro:Ribosomal_L15_bac-type
SUPFAM:SSF52080	UniParc:UPI0002948DE7	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:46583957..46585136

Molecular Weight (calculated)

11516.2 Da

IEP (calculated)

11.079

GRAVY (calculated)

-0.505

Length

103 amino acids

Sequence
(BLAST)

001: MGRGSEQIKW PIHLEVSRVT VRAKEAVEAA GGSVRRVYYN KLGLKALVKP EWFEKKGRLL PRAARPPPKQ KDKVDSIGRL PAPTKPIPFL VEASKDLPVQ
101: HLS

Best Arabidopsis Sequence Match ( AT5G64670.1 )
(BLAST)

001: MLRRRLLSII STSLINSSFH QTAKPRFIIS SPLLQCRPSP ISTQIPTSTS RALSFQGIRA YSLLSLNDLR DNVPRKLKTR KGRGIGSGKG KTAGRGHKGQ
101: KARGTMKFGF EGGQTPLRRR LPKRGFKNKF KLHFQPVGLG KIAKLINAGK IDSHELITMK TLKDVGAIGK QIEDGVRLMG RGADDIKWPL HFEVSRVTVR
201: AKEVVEAAGG SVRRVYYNKL GLRALLKPEW FEKKGRLLPK AARPPPKQQD KVDSIGRLPA PKKPIPFFAA EETKVESPVE S

Arabidopsis Description

Ribosomal protein L18e/L15 superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FLF3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.