Factsheet for Bra037788.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 6
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81240	Canola	mitochondrion, plastid	93.53	92.53
CDY18700	Canola	mitochondrion, plastid	91.73	91.73
Bra024320.1-P	Field mustard	mitochondrion, plastid	90.29	89.32
AT5G64670.1	Thale cress	mitochondrion, plastid	86.33	85.41
KRH13508	Soybean	cytosol	26.98	72.82
VIT_13s0019g04930.t01	Wine grape	mitochondrion	70.5	69.26
Solyc02g081310.2.1	Tomato	plastid	64.39	63.48
PGSC0003DMT400043119	Potato	mitochondrion, plastid	64.39	63.48
KRH43653	Soybean	mitochondrion	63.31	62.86
KRH13797	Soybean	mitochondrion	62.95	62.5
EES00619	Sorghum	mitochondrion	62.95	59.93
Zm00001d040588_P004	Maize	mitochondrion	61.87	59.93
GSMUA_Achr11P...	Banana	mitochondrion	62.95	59.52
Os08t0310100-01	Rice	nucleus	62.59	58.98
TraesCS3A01G268300.1	Wheat	mitochondrion	61.51	58.16
TraesCS3D01G268400.1	Wheat	mitochondrion	61.15	57.24
TraesCS3B01G302700.1	Wheat	mitochondrion	60.79	56.9
HORVU3Hr1G062510.1	Barley	plastid	61.87	52.6
HORVU4Hr1G078100.1	Barley	plastid	19.06	41.09
HORVU5Hr1G041420.1	Barley	endoplasmic reticulum	23.02	39.26
Bra025174.1-P	Field mustard	plastid	22.66	23.33
Bra017341.1-P	Field mustard	plastid	23.02	22.86

Protein Annotations

MapMan:17.7.1.1.13	Gene3D:3.100.10.10	EnsemblPlantsGene:Bra037788	EnsemblPlants:Bra037788.1	EnsemblPlants:Bra037788.1-P	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015934	GO:GO:0019538	InterPro:L18e/L15P_sf	UniProt:M4F9M5	HAMAP:MF_01341	PFAM:PF00828
PANTHER:PTHR12934	PANTHER:PTHR12934:SF12	InterPro:Ribosomal_L15	InterPro:Ribosomal_L15_bac-type	InterPro:Ribosomal_L18e/L15P	SUPFAM:SSF52080
TIGRFAMs:TIGR01071	UniParc:UPI0002541AD5	SEG:seg	:	:	:

Description

AT5G64670 (E=1e-132) | ribosomal protein L15 family protein

Coordinates

chrA09:-:3577176..3578373

Molecular Weight (calculated)

30788.7 Da

IEP (calculated)

11.673

GRAVY (calculated)

-0.588

Length

278 amino acids

Sequence
(BLAST)

001: MIRRRISSII STSLLNSSIH HASKPRFVTS SPLLQCRRSP ILTQTPTFAR SFQGISAYSL LSLNDQRDNV PRKLKTRKVR GIGSGKGKTA GRGHKGQKAS
101: GTMKFGSEGG QTPLRRRLPK RGFKNKFKLH FQPVGLGKIA KLINAGEIDS HELITMKTLK DVGAIGKQIE DGVRLMGRGA DEIKWPLHFE VSRVTVRAKE
201: GVEAAGGSGR RVYYNKLGLR ALLKPEWFEK KGRLLPKAAR PPPKQQDRVD SIGRLPAPKK PIPFFSAEEN KVESPVES

Best Arabidopsis Sequence Match ( AT5G64670.1 )
(BLAST)

001: MLRRRLLSII STSLINSSFH QTAKPRFIIS SPLLQCRPSP ISTQIPTSTS RALSFQGIRA YSLLSLNDLR DNVPRKLKTR KGRGIGSGKG KTAGRGHKGQ
101: KARGTMKFGF EGGQTPLRRR LPKRGFKNKF KLHFQPVGLG KIAKLINAGK IDSHELITMK TLKDVGAIGK QIEDGVRLMG RGADDIKWPL HFEVSRVTVR
201: AKEVVEAAGG SVRRVYYNKL GLRALLKPEW FEKKGRLLPK AARPPPKQQD KVDSIGRLPA PKKPIPFFAA EETKVESPVE S

Arabidopsis Description

Ribosomal protein L18e/L15 superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FLF3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.