Factsheet for TraesCS3A01G268300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G268400.1	Wheat	mitochondrion	94.22	93.27
TraesCS3B01G302700.1	Wheat	mitochondrion	94.22	93.27
Zm00001d040588_P004	Maize	mitochondrion	76.19	78.05
Os08t0310100-01	Rice	nucleus	78.23	77.97
EES00619	Sorghum	mitochondrion	77.21	77.74
KRH13508	Soybean	cytosol	25.17	71.84
HORVU3Hr1G062510.1	Barley	plastid	75.51	67.89
PGSC0003DMT400043119	Potato	mitochondrion, plastid	63.95	66.67
Solyc02g081310.2.1	Tomato	plastid	63.61	66.31
GSMUA_Achr11P...	Banana	mitochondrion	65.65	65.65
VIT_13s0019g04930.t01	Wine grape	mitochondrion	62.93	65.37
KRH13797	Soybean	mitochondrion	60.2	63.21
KRH43653	Soybean	mitochondrion	60.2	63.21
CDY18700	Canola	mitochondrion, plastid	59.52	62.95
AT5G64670.1	Thale cress	mitochondrion, plastid	59.86	62.63
Bra024320.1-P	Field mustard	mitochondrion, plastid	59.52	62.28
CDY08860	Canola	mitochondrion, plastid	59.18	61.92
CDX84541	Canola	mitochondrion, plastid	58.84	61.57
CDX81240	Canola	mitochondrion, plastid	58.84	61.57
Bra037788.1-P	Field mustard	mitochondrion, plastid	58.16	61.51
HORVU4Hr1G078100.1	Barley	plastid	24.15	55.04
HORVU5Hr1G041420.1	Barley	endoplasmic reticulum	26.53	47.85
TraesCS4A01G065400.1	Wheat	plastid	22.11	24.53

Protein Annotations

MapMan:17.7.1.1.13	Gene3D:3.100.10.10	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015934	GO:GO:0019538	InterPro:L18e/L15P_sf
HAMAP:MF_01341	PFAM:PF00828	PANTHER:PTHR12934	PANTHER:PTHR12934:SF12	InterPro:Ribosomal_L15	InterPro:Ribosomal_L15_bac-type
InterPro:Ribosomal_L18e/L15P	SUPFAM:SSF52080	TIGRFAMs:TIGR01071	EnsemblPlantsGene:TraesCS3A01G268300	EnsemblPlants:TraesCS3A01G268300.1	SEG:seg

Description

No Description!

Coordinates

chr3A:+:494038436..494041924

Molecular Weight (calculated)

32313.8 Da

IEP (calculated)

12.082

GRAVY (calculated)

-0.562

Length

294 amino acids

Sequence
(BLAST)

001: MLRRASQLLR TVPTAAVFPR RLPQPHRHPL PAPPAYLLPA PRQPSYFYAT ESAAARPPKV PRPLRTVGSL LRLNDIRDNP GATQQKTRKG RGIGSGKGKT
101: AGRGHKGQKA RGTARFGFEG GQTPLRRRLP RRGFKNRFSL TFQPCGLGKI AKLINAGKID SSELITMKTL KDTSAIGKQI KDGIRLMGRG AEEIKWPIHL
201: EVSRATARAK AAVEAAGGTV RLVYYNKLGF RALLKPEWFA KKGRLIPKAA RPPPKQRDKV DSIGRLPAPT KPLPFTPEEL EFTAKREAAK VIAA

Best Arabidopsis Sequence Match ( AT5G64670.1 )
(BLAST)

001: MLRRRLLSII STSLINSSFH QTAKPRFIIS SPLLQCRPSP ISTQIPTSTS RALSFQGIRA YSLLSLNDLR DNVPRKLKTR KGRGIGSGKG KTAGRGHKGQ
101: KARGTMKFGF EGGQTPLRRR LPKRGFKNKF KLHFQPVGLG KIAKLINAGK IDSHELITMK TLKDVGAIGK QIEDGVRLMG RGADDIKWPL HFEVSRVTVR
201: AKEVVEAAGG SVRRVYYNKL GLRALLKPEW FEKKGRLLPK AARPPPKQQD KVDSIGRLPA PKKPIPFFAA EETKVESPVE S

Arabidopsis Description

Ribosomal protein L18e/L15 superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FLF3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.