Factsheet for AT5G64670.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81240	Canola	mitochondrion, plastid	89.32	89.32
CDY18700	Canola	mitochondrion, plastid	88.26	89.21
Bra024320.1-P	Field mustard	mitochondrion, plastid	88.97	88.97
Bra037788.1-P	Field mustard	mitochondrion, plastid	85.41	86.33
CDX84541	Canola	mitochondrion, plastid	85.77	85.77
CDY08860	Canola	mitochondrion, plastid	85.05	85.05
KRH13508	Soybean	cytosol	27.4	74.76
VIT_13s0019g04930.t01	Wine grape	mitochondrion	73.67	73.14
Solyc02g081310.2.1	Tomato	plastid	67.26	67.02
PGSC0003DMT400043119	Potato	mitochondrion, plastid	67.26	67.02
KRH43653	Soybean	mitochondrion	64.06	64.29
KRH13797	Soybean	mitochondrion	63.7	63.93
EES00619	Sorghum	mitochondrion	64.77	62.33
Zm00001d040588_P004	Maize	mitochondrion	63.35	62.02
GSMUA_Achr11P...	Banana	mitochondrion	64.06	61.22
Os08t0310100-01	Rice	nucleus	64.06	61.02
TraesCS3A01G268300.1	Wheat	mitochondrion	62.63	59.86
TraesCS3B01G302700.1	Wheat	mitochondrion	62.28	58.92
TraesCS3D01G268400.1	Wheat	mitochondrion	62.28	58.92
HORVU3Hr1G062510.1	Barley	plastid	63.7	54.74
HORVU4Hr1G078100.1	Barley	plastid	21.0	45.74
HORVU5Hr1G041420.1	Barley	endoplasmic reticulum	24.91	42.94
AT3G25920.1	Thale cress	plastid	23.84	24.19

Protein Annotations

MapMan:17.7.1.1.13	Gene3D:3.100.10.10	EntrezGene:836588	UniProt:A0A178UPM8	ProteinID:AED97935.1	ArrayExpress:AT5G64670
EnsemblPlantsGene:AT5G64670	RefSeq:AT5G64670	TAIR:AT5G64670	RefSeq:AT5G64670-TAIR-G	EnsemblPlants:AT5G64670.1	TAIR:AT5G64670.1
EMBL:AY081346	EMBL:AY085231	EMBL:AY128843	Unigene:At.27547	ProteinID:BAB11434.1	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005762	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015934	GO:GO:0019538	InterPro:L18e/L15P_sf	HAMAP:MF_01341
RefSeq:NP_201272.1	ProteinID:OAO95625.1	PFAM:PF00828	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PANTHER:PTHR12934	PANTHER:PTHR12934:SF12	UniProt:Q9FLF3	InterPro:Ribosomal_L15	InterPro:Ribosomal_L15_bac-type	InterPro:Ribosomal_L18e/L15P
SUPFAM:SSF52080	TIGRFAMs:TIGR01071	UniParc:UPI00000A9BEF	SEG:seg	:	:

Description

Ribosomal protein L18e/L15 superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FLF3]

Coordinates

chr5:-:25852241..25854067

Molecular Weight (calculated)

31201.5 Da

IEP (calculated)

11.758

GRAVY (calculated)

-0.498

Length

281 amino acids

Sequence
(BLAST)

001: MLRRRLLSII STSLINSSFH QTAKPRFIIS SPLLQCRPSP ISTQIPTSTS RALSFQGIRA YSLLSLNDLR DNVPRKLKTR KGRGIGSGKG KTAGRGHKGQ
101: KARGTMKFGF EGGQTPLRRR LPKRGFKNKF KLHFQPVGLG KIAKLINAGK IDSHELITMK TLKDVGAIGK QIEDGVRLMG RGADDIKWPL HFEVSRVTVR
201: AKEVVEAAGG SVRRVYYNKL GLRALLKPEW FEKKGRLLPK AARPPPKQQD KVDSIGRLPA PKKPIPFFAA EETKVESPVE S

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.