Factsheet for HORVU5Hr1G041420.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G078100.1	Barley	plastid	31.29	39.53
EES00619	Sorghum	mitochondrion	47.85	26.71
TraesCS3D01G268400.1	Wheat	mitochondrion	48.47	26.6
TraesCS3B01G302700.1	Wheat	mitochondrion	48.47	26.6
TraesCS3A01G268300.1	Wheat	mitochondrion	47.85	26.53
Zm00001d040588_P004	Maize	mitochondrion	46.01	26.13
Os08t0310100-01	Rice	nucleus	46.01	25.42
AT5G64670.1	Thale cress	mitochondrion, plastid	42.94	24.91
VIT_13s0019g04930.t01	Wine grape	mitochondrion	42.94	24.73
Bra024320.1-P	Field mustard	mitochondrion, plastid	42.33	24.56
PGSC0003DMT400043119	Potato	mitochondrion, plastid	42.33	24.47
CDX84541	Canola	mitochondrion, plastid	41.72	24.2
Solyc02g081310.2.1	Tomato	plastid	41.72	24.11
CDY18700	Canola	mitochondrion, plastid	41.1	24.1
CDY08860	Canola	mitochondrion, plastid	41.1	23.84
CDX81240	Canola	mitochondrion, plastid	41.1	23.84
GSMUA_Achr11P...	Banana	mitochondrion	42.94	23.81
HORVU3Hr1G062510.1	Barley	plastid	47.24	23.55
Bra037788.1-P	Field mustard	mitochondrion, plastid	39.26	23.02
KRH43653	Soybean	mitochondrion	38.04	22.14
KRH13797	Soybean	mitochondrion	37.42	21.79
KRH13508	Soybean	cytosol	0.0	0.0

Protein Annotations

MapMan:35.2	UniProt:A0A287QXV2	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015934	GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G041420
EnsemblPlants:HORVU5Hr1G041420.1	InterPro:L18e/L15P_sf	PFAM:PF00828	PANTHER:PTHR12934	PANTHER:PTHR12934:SF12	InterPro:Ribosomal_L15_bac-type
InterPro:Ribosomal_L18e/L15P	SUPFAM:SSF52080	SignalP:SignalP-noTM	TIGRFAMs:TIGR01071	UniParc:UPI000B470148	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:313628853..313629925

Molecular Weight (calculated)

14046.6 Da

IEP (calculated)

12.240

GRAVY (calculated)

-0.180

Length

163 amino acids

Sequence
(BLAST)

001: SFFLLLFILF XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXPPPCSP AAAVLPRRIP QPHPAPPAVL LRDNPGATQQ KTRKGRGIGS GKGKMAGRGH
101: KGQKARDTAR FGFEGGRTPL RRRLPRRTYV MLVIFRCGQP CGLGKIVKLI SAGKIDSSEL IIH

Best Arabidopsis Sequence Match ( AT5G64670.1 )
(BLAST)

001: MLRRRLLSII STSLINSSFH QTAKPRFIIS SPLLQCRPSP ISTQIPTSTS RALSFQGIRA YSLLSLNDLR DNVPRKLKTR KGRGIGSGKG KTAGRGHKGQ
101: KARGTMKFGF EGGQTPLRRR LPKRGFKNKF KLHFQPVGLG KIAKLINAGK IDSHELITMK TLKDVGAIGK QIEDGVRLMG RGADDIKWPL HFEVSRVTVR
201: AKEVVEAAGG SVRRVYYNKL GLRALLKPEW FEKKGRLLPK AARPPPKQQD KVDSIGRLPA PKKPIPFFAA EETKVESPVE S

Arabidopsis Description

Ribosomal protein L18e/L15 superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FLF3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.