Factsheet for HORVU4Hr1G078100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G041420.1	Barley	endoplasmic reticulum	39.53	31.29
Os08t0310100-01	Rice	nucleus	58.91	25.76
EES00619	Sorghum	mitochondrion	55.81	24.66
Zm00001d040588_P004	Maize	mitochondrion	54.26	24.39
TraesCS3D01G268400.1	Wheat	mitochondrion	55.81	24.24
TraesCS3B01G302700.1	Wheat	mitochondrion	55.81	24.24
TraesCS3A01G268300.1	Wheat	mitochondrion	55.04	24.15
GSMUA_Achr11P...	Banana	mitochondrion	51.16	22.45
HORVU3Hr1G062510.1	Barley	plastid	55.81	22.02
AT5G64670.1	Thale cress	mitochondrion, plastid	45.74	21.0
Solyc02g081310.2.1	Tomato	plastid	45.74	20.92
PGSC0003DMT400043119	Potato	mitochondrion, plastid	45.74	20.92
CDY18700	Canola	mitochondrion, plastid	44.19	20.5
KRH13797	Soybean	mitochondrion	44.19	20.36
Bra024320.1-P	Field mustard	mitochondrion, plastid	44.19	20.28
CDY08860	Canola	mitochondrion, plastid	44.19	20.28
VIT_13s0019g04930.t01	Wine grape	mitochondrion	44.19	20.14
CDX84541	Canola	mitochondrion, plastid	43.41	19.93
KRH43653	Soybean	mitochondrion	42.64	19.64
CDX81240	Canola	mitochondrion, plastid	42.64	19.57
Bra037788.1-P	Field mustard	mitochondrion, plastid	41.09	19.06
KRH13508	Soybean	cytosol	0.0	0.0

Protein Annotations

MapMan:35.2	UniProt:A0A287PRT0	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015934	GO:GO:0019538	EnsemblPlantsGene:HORVU4Hr1G078100
EnsemblPlants:HORVU4Hr1G078100.1	InterPro:L18e/L15P_sf	PFAM:PF00828	PANTHER:PTHR12934	PANTHER:PTHR12934:SF12	InterPro:Ribosomal_L15_bac-type
InterPro:Ribosomal_L18e/L15P	SUPFAM:SSF52080	TIGRFAMs:TIGR01071	UniParc:UPI000B487785	:	:

Description

No Description!

Coordinates

chrchr4H:-:606349450..606350345

Molecular Weight (calculated)

14357.0 Da

IEP (calculated)

10.854

GRAVY (calculated)

-1.040

Length

129 amino acids

Sequence
(BLAST)

001: LPPDEPLPPS RSTPCKAGAS YFYATQSAAS RTPKASRQLR TEGSLQRLND LRDNPDATQQ KMRKGCGIGS GKGKTAGRGH KGQKAHDTAR FGFEGGQTPL
101: RRHLPRRGFK NRFSLMFQEC YLDKDYVPF

Best Arabidopsis Sequence Match ( AT5G64670.1 )
(BLAST)

001: MLRRRLLSII STSLINSSFH QTAKPRFIIS SPLLQCRPSP ISTQIPTSTS RALSFQGIRA YSLLSLNDLR DNVPRKLKTR KGRGIGSGKG KTAGRGHKGQ
101: KARGTMKFGF EGGQTPLRRR LPKRGFKNKF KLHFQPVGLG KIAKLINAGK IDSHELITMK TLKDVGAIGK QIEDGVRLMG RGADDIKWPL HFEVSRVTVR
201: AKEVVEAAGG SVRRVYYNKL GLRALLKPEW FEKKGRLLPK AARPPPKQQD KVDSIGRLPA PKKPIPFFAA EETKVESPVE S

Arabidopsis Description

Ribosomal protein L18e/L15 superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FLF3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.